Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 AL032819.2-201ENST00000624543 2162 ntBASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 HLA-G-202ENST00000376815 851 ntBASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 HLA-G-203ENST00000376818 1127 ntBASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 AC005829.2-201ENST00000571422 1056 ntBASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 AC060766.5-201ENST00000590539 871 ntBASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 AL031963.3-201ENST00000606441 850 ntBASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 KRT8P20-201ENST00000423953 1409 ntBASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.75■□□□□ 0.27
ATPAF1Q5TC12 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF1Q5TC12 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF1Q5TC12 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms