Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.36
TTC39AQ5SRH9 TREX1-205ENST00000625293 1783 ntBASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 ZNF815P-204ENST00000434898 1737 ntBASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC39AQ5SRH9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 AC211429.1-201ENST00000415277 523 ntBASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 DGCR10-201ENST00000609839 495 ntBASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.56■■□□□ 1.36
TTC39AQ5SRH9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 AC104417.2-201ENST00000562989 1793 ntBASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 FAM207BP-201ENST00000447172 505 ntBASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 AC097488.1-201ENST00000507834 756 ntBASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 FITM1-202ENST00000559294 800 ntBASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 KRT8P9-201ENST00000558927 1449 ntBASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.55■■□□□ 1.36
TTC39AQ5SRH9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 SLC25A1P4-201ENST00000567977 778 ntBASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 AP000692.2-201ENST00000608391 879 ntBASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 AC133561.5-201ENST00000635547 218 ntBASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 KRT8P41-201ENST00000533985 1514 ntBASIC23.54■■□□□ 1.36
TTC39AQ5SRH9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 AFG3L1P-217ENST00000557444 2447 ntBASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms