Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAE1P78406 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.37■□□□□ 0.53
RAE1P78406 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.37■□□□□ 0.53
RAE1P78406 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.37■□□□□ 0.53
RAE1P78406 KRT17P3-201ENST00000420566 1262 ntBASIC18.37■□□□□ 0.53
RAE1P78406 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.37■□□□□ 0.53
RAE1P78406 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.37■□□□□ 0.53
RAE1P78406 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.37■□□□□ 0.53
RAE1P78406 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.37■□□□□ 0.53
RAE1P78406 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.37■□□□□ 0.53
RAE1P78406 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
RAE1P78406 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAE1P78406 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.37■□□□□ 0.53
RAE1P78406 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RAE1P78406 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.37■□□□□ 0.53
RAE1P78406 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.37■□□□□ 0.53
RAE1P78406 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RAE1P78406 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RAE1P78406 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAE1P78406 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAE1P78406 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAE1P78406 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.36■□□□□ 0.53
RAE1P78406 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.36■□□□□ 0.53
RAE1P78406 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAE1P78406 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAE1P78406 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAE1P78406 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAE1P78406 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.36■□□□□ 0.53
RAE1P78406 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAE1P78406 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAE1P78406 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.36■□□□□ 0.53
RAE1P78406 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.36■□□□□ 0.53
RAE1P78406 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.36■□□□□ 0.53
RAE1P78406 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.36■□□□□ 0.53
RAE1P78406 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
RAE1P78406 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.36■□□□□ 0.53
RAE1P78406 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.36■□□□□ 0.53
RAE1P78406 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAE1P78406 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAE1P78406 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
RAE1P78406 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAE1P78406 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RAE1P78406 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RAE1P78406 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RAE1P78406 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RAE1P78406 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
RAE1P78406 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.35■□□□□ 0.53
RAE1P78406 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.35■□□□□ 0.53
RAE1P78406 C1QL1P1-201ENST00000568105 661 ntBASIC18.35■□□□□ 0.53
RAE1P78406 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.35■□□□□ 0.53
RAE1P78406 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAE1P78406 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAE1P78406 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
RAE1P78406 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
RAE1P78406 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.34■□□□□ 0.53
RAE1P78406 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAE1P78406 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAE1P78406 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.34■□□□□ 0.53
RAE1P78406 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAE1P78406 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
RAE1P78406 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
RAE1P78406 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAE1P78406 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
RAE1P78406 FP475955.4-201ENST00000623131 1990 ntBASIC18.34■□□□□ 0.53
RAE1P78406 ESRRAP1-201ENST00000400596 1257 ntBASIC18.34■□□□□ 0.53
RAE1P78406 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.34■□□□□ 0.53
RAE1P78406 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.34■□□□□ 0.53
RAE1P78406 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAE1P78406 HLA-A-209ENST00000638375 975 ntBASIC18.34■□□□□ 0.53
RAE1P78406 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms