Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.39■□□□□ 0.54
GABREP78334 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
GABREP78334 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABREP78334 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABREP78334 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.39■□□□□ 0.53
GABREP78334 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.39■□□□□ 0.53
GABREP78334 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.39■□□□□ 0.53
GABREP78334 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.39■□□□□ 0.53
GABREP78334 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.39■□□□□ 0.53
GABREP78334 AL691432.3-201ENST00000621860 400 ntBASIC18.39■□□□□ 0.53
GABREP78334 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABREP78334 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABREP78334 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
GABREP78334 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.39■□□□□ 0.53
GABREP78334 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABREP78334 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
GABREP78334 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.39■□□□□ 0.53
GABREP78334 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABREP78334 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABREP78334 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GABREP78334 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
GABREP78334 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GABREP78334 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GABREP78334 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.38■□□□□ 0.53
GABREP78334 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
GABREP78334 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.38■□□□□ 0.53
GABREP78334 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.38■□□□□ 0.53
GABREP78334 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.38■□□□□ 0.53
GABREP78334 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.38■□□□□ 0.53
GABREP78334 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
GABREP78334 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GABREP78334 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.38■□□□□ 0.53
GABREP78334 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABREP78334 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABREP78334 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GABREP78334 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GABREP78334 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
GABREP78334 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.37■□□□□ 0.53
GABREP78334 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABREP78334 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABREP78334 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
GABREP78334 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABREP78334 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GABREP78334 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GABREP78334 AP000523.1-201ENST00000398242 1049 ntBASIC18.37■□□□□ 0.53
GABREP78334 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GABREP78334 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.37■□□□□ 0.53
GABREP78334 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.37■□□□□ 0.53
GABREP78334 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.37■□□□□ 0.53
GABREP78334 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.37■□□□□ 0.53
GABREP78334 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.37■□□□□ 0.53
GABREP78334 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GABREP78334 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.37■□□□□ 0.53
GABREP78334 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GABREP78334 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GABREP78334 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABREP78334 KRT8P45-201ENST00000414328 1447 ntBASIC18.37■□□□□ 0.53
GABREP78334 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GABREP78334 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
GABREP78334 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABREP78334 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GABREP78334 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.37■□□□□ 0.53
GABREP78334 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.37■□□□□ 0.53
GABREP78334 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABREP78334 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABREP78334 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABREP78334 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
GABREP78334 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABREP78334 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABREP78334 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABREP78334 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.36■□□□□ 0.53
GABREP78334 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.36■□□□□ 0.53
GABREP78334 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABREP78334 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABREP78334 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABREP78334 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABREP78334 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABREP78334 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
GABREP78334 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABREP78334 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABREP78334 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.36■□□□□ 0.53
GABREP78334 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GABREP78334 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms