Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.51■□□□□ 0.71
AP1S1P61966 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
AP1S1P61966 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP1S1P61966 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
AP1S1P61966 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
AP1S1P61966 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP1S1P61966 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
AP1S1P61966 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.5■□□□□ 0.71
AP1S1P61966 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.5■□□□□ 0.71
AP1S1P61966 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.5■□□□□ 0.71
AP1S1P61966 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP1S1P61966 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP1S1P61966 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP1S1P61966 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.5■□□□□ 0.71
AP1S1P61966 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.5■□□□□ 0.71
AP1S1P61966 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.5■□□□□ 0.71
AP1S1P61966 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.5■□□□□ 0.71
AP1S1P61966 AP003071.4-201ENST00000562276 1284 ntBASIC19.5■□□□□ 0.71
AP1S1P61966 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.5■□□□□ 0.71
AP1S1P61966 MIR6786-201ENST00000616843 113 ntBASIC19.5■□□□□ 0.71
AP1S1P61966 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
AP1S1P61966 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP1S1P61966 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP1S1P61966 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP1S1P61966 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP1S1P61966 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.5■□□□□ 0.71
AP1S1P61966 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 RCC2P6-201ENST00000526625 1557 ntBASIC19.49■□□□□ 0.71
AP1S1P61966 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
AP1S1P61966 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
AP1S1P61966 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.49■□□□□ 0.71
AP1S1P61966 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.49■□□□□ 0.71
AP1S1P61966 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.49■□□□□ 0.71
AP1S1P61966 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.49■□□□□ 0.71
AP1S1P61966 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.49■□□□□ 0.71
AP1S1P61966 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.49■□□□□ 0.71
AP1S1P61966 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.49■□□□□ 0.71
AP1S1P61966 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.49■□□□□ 0.71
AP1S1P61966 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
AP1S1P61966 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP1S1P61966 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
AP1S1P61966 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.48■□□□□ 0.71
AP1S1P61966 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.48■□□□□ 0.71
AP1S1P61966 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.48■□□□□ 0.71
AP1S1P61966 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.48■□□□□ 0.71
AP1S1P61966 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
AP1S1P61966 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.48■□□□□ 0.71
AP1S1P61966 AC004951.3-201ENST00000418645 1148 ntBASIC19.48■□□□□ 0.71
AP1S1P61966 B3GAT3P1-201ENST00000471720 806 ntBASIC19.48■□□□□ 0.71
AP1S1P61966 REXO1L10P-201ENST00000615707 1290 ntBASIC19.48■□□□□ 0.71
AP1S1P61966 REXO1L12P-201ENST00000622156 912 ntBASIC19.48■□□□□ 0.71
AP1S1P61966 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
AP1S1P61966 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.48■□□□□ 0.71
AP1S1P61966 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
AP1S1P61966 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
AP1S1P61966 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
AP1S1P61966 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.48■□□□□ 0.71
AP1S1P61966 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP1S1P61966 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
AP1S1P61966 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
AP1S1P61966 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP1S1P61966 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP1S1P61966 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP1S1P61966 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP1S1P61966 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP1S1P61966 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP1S1P61966 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.47■□□□□ 0.71
AP1S1P61966 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.47■□□□□ 0.71
AP1S1P61966 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP1S1P61966 MESTP1-201ENST00000404287 994 ntBASIC19.47■□□□□ 0.71
AP1S1P61966 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
AP1S1P61966 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
AP1S1P61966 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.47■□□□□ 0.71
AP1S1P61966 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms