Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
CDH6P55285 AC104417.2-201ENST00000562989 1793 ntBASIC20.12■□□□□ 0.81
CDH6P55285 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH6P55285 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CDH6P55285 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH6P55285 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH6P55285 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH6P55285 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH6P55285 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH6P55285 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CDH6P55285 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH6P55285 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH6P55285 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CDH6P55285 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH6P55285 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH6P55285 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CDH6P55285 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH6P55285 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CDH6P55285 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CDH6P55285 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH6P55285 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.11■□□□□ 0.81
CDH6P55285 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH6P55285 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.11■□□□□ 0.81
CDH6P55285 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH6P55285 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CDH6P55285 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH6P55285 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH6P55285 BX323043.1-201ENST00000641006 1765 ntBASIC20.11■□□□□ 0.81
CDH6P55285 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH6P55285 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH6P55285 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 SDHAP1-207ENST00000440850 2000 ntBASIC20.1■□□□□ 0.81
CDH6P55285 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH6P55285 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH6P55285 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 MIR4651-201ENST00000582622 73 ntBASIC20.1■□□□□ 0.81
CDH6P55285 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH6P55285 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CDH6P55285 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDH6P55285 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH6P55285 TEX21P-204ENST00000641479 1693 ntBASIC20.1■□□□□ 0.81
CDH6P55285 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH6P55285 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH6P55285 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CDH6P55285 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CDH6P55285 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH6P55285 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH6P55285 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.09■□□□□ 0.81
CDH6P55285 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.09■□□□□ 0.81
CDH6P55285 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 AL023875.1-201ENST00000640777 796 ntBASIC20.09■□□□□ 0.81
CDH6P55285 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CDH6P55285 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH6P55285 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH6P55285 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.09■□□□□ 0.81
CDH6P55285 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms