Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH4P55283 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH4P55283 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDH4P55283 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH4P55283 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CDH4P55283 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.81■□□□□ 0.76
CDH4P55283 DGCR10-201ENST00000609839 495 ntBASIC19.81■□□□□ 0.76
CDH4P55283 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.81■□□□□ 0.76
CDH4P55283 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH4P55283 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH4P55283 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.81■□□□□ 0.76
CDH4P55283 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH4P55283 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDH4P55283 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH4P55283 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH4P55283 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH4P55283 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH4P55283 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDH4P55283 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH4P55283 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH4P55283 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH4P55283 AC091390.4-202ENST00000476426 537 ntBASIC19.8■□□□□ 0.76
CDH4P55283 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
CDH4P55283 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH4P55283 BX088651.1-201ENST00000540551 451 ntBASIC19.8■□□□□ 0.76
CDH4P55283 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.8■□□□□ 0.76
CDH4P55283 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.8■□□□□ 0.76
CDH4P55283 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH4P55283 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH4P55283 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.8■□□□□ 0.76
CDH4P55283 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH4P55283 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.8■□□□□ 0.76
CDH4P55283 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH4P55283 KRT8P41-201ENST00000533985 1514 ntBASIC19.8■□□□□ 0.76
CDH4P55283 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDH4P55283 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH4P55283 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH4P55283 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH4P55283 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH4P55283 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDH4P55283 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH4P55283 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH4P55283 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH4P55283 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDH4P55283 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH4P55283 AC008040.2-201ENST00000461049 708 ntBASIC19.79■□□□□ 0.76
CDH4P55283 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH4P55283 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH4P55283 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH4P55283 AP000692.2-201ENST00000608391 879 ntBASIC19.79■□□□□ 0.76
CDH4P55283 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH4P55283 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH4P55283 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH4P55283 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH4P55283 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH4P55283 AC079598.2-202ENST00000546624 1451 ntBASIC19.79■□□□□ 0.76
CDH4P55283 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH4P55283 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDH4P55283 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH4P55283 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH4P55283 AL158211.5-201ENST00000623583 2518 ntBASIC19.78■□□□□ 0.76
CDH4P55283 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH4P55283 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDH4P55283 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH4P55283 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH4P55283 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH4P55283 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH4P55283 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CDH4P55283 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDH4P55283 FAM207BP-201ENST00000447172 505 ntBASIC19.78■□□□□ 0.76
CDH4P55283 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.78■□□□□ 0.76
CDH4P55283 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH4P55283 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDH4P55283 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.78■□□□□ 0.76
CDH4P55283 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH4P55283 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH4P55283 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH4P55283 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH4P55283 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH4P55283 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH4P55283 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH4P55283 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH4P55283 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CDH4P55283 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH4P55283 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH4P55283 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH4P55283 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH4P55283 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDH4P55283 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CDH4P55283 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CDH4P55283 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.77■□□□□ 0.76
CDH4P55283 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH4P55283 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH4P55283 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.77■□□□□ 0.76
CDH4P55283 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH4P55283 AP000525.1-201ENST00000608286 694 ntBASIC19.77■□□□□ 0.76
CDH4P55283 AC073912.3-201ENST00000624414 853 ntBASIC19.77■□□□□ 0.76
CDH4P55283 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDH4P55283 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH4P55283 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms