Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDKN2DP55273 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CDKN2DP55273 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.12■□□□□ 0.65
CDKN2DP55273 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDKN2DP55273 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.12■□□□□ 0.65
CDKN2DP55273 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDKN2DP55273 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.12■□□□□ 0.65
CDKN2DP55273 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDKN2DP55273 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDKN2DP55273 RNF165-205ENST00000588679 2904 ntBASIC19.12■□□□□ 0.65
CDKN2DP55273 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDKN2DP55273 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDKN2DP55273 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDKN2DP55273 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.12■□□□□ 0.65
CDKN2DP55273 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDKN2DP55273 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDKN2DP55273 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDKN2DP55273 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.11■□□□□ 0.65
CDKN2DP55273 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.11■□□□□ 0.65
CDKN2DP55273 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDKN2DP55273 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDKN2DP55273 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.11■□□□□ 0.65
CDKN2DP55273 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDKN2DP55273 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDKN2DP55273 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDKN2DP55273 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDKN2DP55273 AC026366.1-201ENST00000488803 879 ntBASIC19.11■□□□□ 0.65
CDKN2DP55273 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
CDKN2DP55273 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.11■□□□□ 0.65
CDKN2DP55273 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CDKN2DP55273 AC069544.1-201ENST00000609399 999 ntBASIC19.11■□□□□ 0.65
CDKN2DP55273 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDKN2DP55273 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CDKN2DP55273 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDKN2DP55273 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.11■□□□□ 0.65
CDKN2DP55273 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDKN2DP55273 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.11■□□□□ 0.65
CDKN2DP55273 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDKN2DP55273 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.11■□□□□ 0.65
CDKN2DP55273 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.11■□□□□ 0.65
CDKN2DP55273 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.1■□□□□ 0.65
CDKN2DP55273 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CDKN2DP55273 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.1■□□□□ 0.65
CDKN2DP55273 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDKN2DP55273 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.1■□□□□ 0.65
CDKN2DP55273 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.1■□□□□ 0.65
CDKN2DP55273 KRT18P6-201ENST00000555540 1265 ntBASIC19.1■□□□□ 0.65
CDKN2DP55273 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.1■□□□□ 0.65
CDKN2DP55273 MTDHP1-201ENST00000605323 784 ntBASIC19.1■□□□□ 0.65
CDKN2DP55273 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.1■□□□□ 0.65
CDKN2DP55273 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CDKN2DP55273 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDKN2DP55273 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKN2DP55273 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 NBPF21P-201ENST00000425093 1451 ntBASIC19.09■□□□□ 0.65
CDKN2DP55273 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.09■□□□□ 0.65
CDKN2DP55273 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CDKN2DP55273 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CDKN2DP55273 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.09■□□□□ 0.65
CDKN2DP55273 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CDKN2DP55273 PRKY-204ENST00000533551 1019 ntBASIC19.09■□□□□ 0.65
CDKN2DP55273 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.09■□□□□ 0.65
CDKN2DP55273 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.09■□□□□ 0.65
CDKN2DP55273 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.09■□□□□ 0.65
CDKN2DP55273 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.09■□□□□ 0.65
CDKN2DP55273 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.09■□□□□ 0.65
CDKN2DP55273 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKN2DP55273 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CDKN2DP55273 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDKN2DP55273 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CDKN2DP55273 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CDKN2DP55273 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms