Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
VCPP55072 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
VCPP55072 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCPP55072 KRT16P5-201ENST00000455284 522 ntBASIC20.7■□□□□ 0.9
VCPP55072 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCPP55072 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VCPP55072 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.7■□□□□ 0.9
VCPP55072 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.7■□□□□ 0.9
VCPP55072 AC010203.1-204ENST00000548782 407 ntBASIC20.7■□□□□ 0.9
VCPP55072 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.7■□□□□ 0.9
VCPP55072 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
VCPP55072 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCPP55072 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCPP55072 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.7■□□□□ 0.9
VCPP55072 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCPP55072 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCPP55072 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VCPP55072 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VCPP55072 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.69■□□□□ 0.9
VCPP55072 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.69■□□□□ 0.9
VCPP55072 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPP55072 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VCPP55072 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.69■□□□□ 0.9
VCPP55072 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.69■□□□□ 0.9
VCPP55072 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.69■□□□□ 0.9
VCPP55072 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPP55072 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCPP55072 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPP55072 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPP55072 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPP55072 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VCPP55072 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.69■□□□□ 0.9
VCPP55072 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPP55072 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPP55072 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPP55072 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPP55072 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VCPP55072 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VCPP55072 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.68■□□□□ 0.9
VCPP55072 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.68■□□□□ 0.9
VCPP55072 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.68■□□□□ 0.9
VCPP55072 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.68■□□□□ 0.9
VCPP55072 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.68■□□□□ 0.9
VCPP55072 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VCPP55072 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.68■□□□□ 0.9
VCPP55072 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.68■□□□□ 0.9
VCPP55072 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.68■□□□□ 0.9
VCPP55072 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPP55072 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCPP55072 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCPP55072 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCPP55072 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.67■□□□□ 0.9
VCPP55072 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
VCPP55072 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VCPP55072 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VCPP55072 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
VCPP55072 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCPP55072 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.67■□□□□ 0.9
VCPP55072 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCPP55072 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCPP55072 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VCPP55072 FITM1-202ENST00000559294 800 ntBASIC20.67■□□□□ 0.9
VCPP55072 AC091076.1-201ENST00000610741 619 ntBASIC20.67■□□□□ 0.9
VCPP55072 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
VCPP55072 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCPP55072 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.67■□□□□ 0.9
VCPP55072 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
VCPP55072 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCPP55072 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCPP55072 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.66■□□□□ 0.9
VCPP55072 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.66■□□□□ 0.9
VCPP55072 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.66■□□□□ 0.9
VCPP55072 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.66■□□□□ 0.9
VCPP55072 AC026396.1-201ENST00000419388 421 ntBASIC20.66■□□□□ 0.9
VCPP55072 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.66■□□□□ 0.9
VCPP55072 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.66■□□□□ 0.9
VCPP55072 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.66■□□□□ 0.9
VCPP55072 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
VCPP55072 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.66■□□□□ 0.9
VCPP55072 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.66■□□□□ 0.9
VCPP55072 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VCPP55072 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCPP55072 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
VCPP55072 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms