Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 AC099778.1-201ENST00000568593 1911 ntBASIC14.19□□□□□ -0.14
APOC4P55056 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
APOC4P55056 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.18□□□□□ -0.14
APOC4P55056 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
APOC4P55056 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
APOC4P55056 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 CRYGFP-201ENST00000418459 633 ntBASIC14.18□□□□□ -0.14
APOC4P55056 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC4P55056 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC4P55056 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC4P55056 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.18□□□□□ -0.14
APOC4P55056 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.18□□□□□ -0.14
APOC4P55056 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 AC092667.1-201ENST00000434301 2586 ntBASIC14.18□□□□□ -0.14
APOC4P55056 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC4P55056 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC4P55056 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC4P55056 KRT18P22-201ENST00000402024 1347 ntBASIC14.17□□□□□ -0.14
APOC4P55056 LINC01006-201ENST00000333319 2292 ntBASIC14.17□□□□□ -0.14
APOC4P55056 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.17□□□□□ -0.14
APOC4P55056 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.17□□□□□ -0.14
APOC4P55056 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC4P55056 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
APOC4P55056 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
APOC4P55056 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
APOC4P55056 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.17□□□□□ -0.14
APOC4P55056 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.17□□□□□ -0.14
APOC4P55056 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.17□□□□□ -0.14
APOC4P55056 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOC4P55056 AC128688.1-201ENST00000487626 519 ntBASIC14.17□□□□□ -0.14
APOC4P55056 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.17□□□□□ -0.14
APOC4P55056 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.17□□□□□ -0.14
APOC4P55056 AP000692.2-201ENST00000608391 879 ntBASIC14.17□□□□□ -0.14
APOC4P55056 AC130371.2-201ENST00000619443 611 ntBASIC14.17□□□□□ -0.14
APOC4P55056 AC097493.4-201ENST00000641197 219 ntBASIC14.17□□□□□ -0.14
APOC4P55056 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
APOC4P55056 AL391422.3-201ENST00000603791 2761 ntBASIC14.17□□□□□ -0.14
APOC4P55056 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
APOC4P55056 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOC4P55056 LINC01568-207ENST00000641790 1380 ntBASIC14.17□□□□□ -0.14
APOC4P55056 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.17□□□□□ -0.14
APOC4P55056 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC4P55056 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.17□□□□□ -0.14
APOC4P55056 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC4P55056 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.17□□□□□ -0.14
APOC4P55056 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
APOC4P55056 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.17□□□□□ -0.14
APOC4P55056 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC4P55056 CLDN5-201ENST00000403084 2357 ntBASIC14.17□□□□□ -0.14
APOC4P55056 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC4P55056 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC4P55056 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.17□□□□□ -0.14
APOC4P55056 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC4P55056 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.16□□□□□ -0.14
APOC4P55056 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.16□□□□□ -0.14
APOC4P55056 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.16□□□□□ -0.14
APOC4P55056 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
APOC4P55056 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
APOC4P55056 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.16□□□□□ -0.14
APOC4P55056 AC011506.1-201ENST00000474329 610 ntBASIC14.16□□□□□ -0.14
APOC4P55056 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
APOC4P55056 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.16□□□□□ -0.14
APOC4P55056 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.16□□□□□ -0.14
APOC4P55056 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
APOC4P55056 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.16□□□□□ -0.14
APOC4P55056 AC145285.6-201ENST00000604632 637 ntBASIC14.16□□□□□ -0.14
APOC4P55056 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.16□□□□□ -0.14
APOC4P55056 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC4P55056 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
APOC4P55056 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms