Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.95■□□□□ 0.78
PMS2P54278 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.95■□□□□ 0.78
PMS2P54278 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.95■□□□□ 0.78
PMS2P54278 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.95■□□□□ 0.78
PMS2P54278 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PMS2P54278 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.95■□□□□ 0.78
PMS2P54278 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.95■□□□□ 0.78
PMS2P54278 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.95■□□□□ 0.78
PMS2P54278 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.95■□□□□ 0.78
PMS2P54278 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS2P54278 AL390961.4-201ENST00000623958 2535 ntBASIC19.95■□□□□ 0.78
PMS2P54278 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS2P54278 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS2P54278 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS2P54278 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS2P54278 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PMS2P54278 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.94■□□□□ 0.78
PMS2P54278 MCRIP2P1-201ENST00000394346 511 ntBASIC19.94■□□□□ 0.78
PMS2P54278 AL138781.1-201ENST00000566567 1274 ntBASIC19.94■□□□□ 0.78
PMS2P54278 AC010536.3-201ENST00000620306 533 ntBASIC19.94■□□□□ 0.78
PMS2P54278 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.94■□□□□ 0.78
PMS2P54278 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
PMS2P54278 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS2P54278 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS2P54278 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
PMS2P54278 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS2P54278 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS2P54278 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS2P54278 AC005332.8-201ENST00000622750 2735 ntBASIC19.94■□□□□ 0.78
PMS2P54278 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS2P54278 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PMS2P54278 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
PMS2P54278 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PMS2P54278 AC135050.7-201ENST00000624508 2218 ntBASIC19.94■□□□□ 0.78
PMS2P54278 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.93■□□□□ 0.78
PMS2P54278 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PMS2P54278 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.93■□□□□ 0.78
PMS2P54278 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.93■□□□□ 0.78
PMS2P54278 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS2P54278 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS2P54278 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PMS2P54278 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.93■□□□□ 0.78
PMS2P54278 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
PMS2P54278 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
PMS2P54278 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.93■□□□□ 0.78
PMS2P54278 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.93■□□□□ 0.78
PMS2P54278 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PMS2P54278 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.93■□□□□ 0.78
PMS2P54278 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.93■□□□□ 0.78
PMS2P54278 AC105020.6-201ENST00000621523 1217 ntBASIC19.93■□□□□ 0.78
PMS2P54278 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS2P54278 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PMS2P54278 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PMS2P54278 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PMS2P54278 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS2P54278 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.93■□□□□ 0.78
PMS2P54278 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS2P54278 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PMS2P54278 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.93■□□□□ 0.78
PMS2P54278 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.92■□□□□ 0.78
PMS2P54278 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PMS2P54278 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PMS2P54278 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.92■□□□□ 0.78
PMS2P54278 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PMS2P54278 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 AC100791.3-201ENST00000617619 330 ntBASIC19.92■□□□□ 0.78
PMS2P54278 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PMS2P54278 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.92■□□□□ 0.78
PMS2P54278 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.92■□□□□ 0.78
PMS2P54278 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms