Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SMSP52788 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SMSP52788 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SMSP52788 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.1■□□□□ 0.49
SMSP52788 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.1■□□□□ 0.49
SMSP52788 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.1■□□□□ 0.49
SMSP52788 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.1■□□□□ 0.49
SMSP52788 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.1■□□□□ 0.49
SMSP52788 AC005829.2-201ENST00000571422 1056 ntBASIC18.1■□□□□ 0.49
SMSP52788 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 AL356652.1-201ENST00000615962 565 ntBASIC18.1■□□□□ 0.49
SMSP52788 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SMSP52788 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.1■□□□□ 0.49
SMSP52788 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.1■□□□□ 0.49
SMSP52788 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SMSP52788 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 Z82202.1-201ENST00000623446 1880 ntBASIC18.09■□□□□ 0.49
SMSP52788 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.09■□□□□ 0.49
SMSP52788 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMSP52788 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.09■□□□□ 0.49
SMSP52788 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.09■□□□□ 0.49
SMSP52788 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.09■□□□□ 0.49
SMSP52788 AC009237.14-201ENST00000609975 1594 ntBASIC18.09■□□□□ 0.49
SMSP52788 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.09■□□□□ 0.49
SMSP52788 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMSP52788 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMSP52788 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
SMSP52788 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.09■□□□□ 0.49
SMSP52788 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMSP52788 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMSP52788 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMSP52788 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMSP52788 KRASP1-201ENST00000407852 552 ntBASIC18.09■□□□□ 0.49
SMSP52788 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
SMSP52788 PRKY-204ENST00000533551 1019 ntBASIC18.09■□□□□ 0.49
SMSP52788 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.09■□□□□ 0.49
SMSP52788 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.09■□□□□ 0.49
SMSP52788 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SMSP52788 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMSP52788 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.09■□□□□ 0.49
SMSP52788 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.09■□□□□ 0.49
SMSP52788 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.09■□□□□ 0.49
SMSP52788 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.09■□□□□ 0.49
SMSP52788 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMSP52788 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMSP52788 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
SMSP52788 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMSP52788 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMSP52788 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SMSP52788 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMSP52788 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.08■□□□□ 0.49
SMSP52788 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.08■□□□□ 0.49
SMSP52788 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMSP52788 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.08■□□□□ 0.49
SMSP52788 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMSP52788 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
SMSP52788 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.08■□□□□ 0.49
SMSP52788 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMSP52788 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.08■□□□□ 0.48
SMSP52788 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMSP52788 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.08■□□□□ 0.48
SMSP52788 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMSP52788 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.08■□□□□ 0.48
SMSP52788 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.08■□□□□ 0.48
SMSP52788 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.08■□□□□ 0.48
SMSP52788 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.08■□□□□ 0.48
SMSP52788 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.08■□□□□ 0.48
SMSP52788 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SMSP52788 AC133561.5-201ENST00000635547 218 ntBASIC18.08■□□□□ 0.48
SMSP52788 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMSP52788 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
SMSP52788 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.08■□□□□ 0.48
SMSP52788 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SMSP52788 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMSP52788 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SMSP52788 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMSP52788 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMSP52788 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMSP52788 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMSP52788 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.07■□□□□ 0.48
SMSP52788 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMSP52788 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SMSP52788 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.07■□□□□ 0.48
SMSP52788 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMSP52788 AC120498.9-201ENST00000339021 3867 ntBASIC18.07■□□□□ 0.48
SMSP52788 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMSP52788 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMSP52788 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMSP52788 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.07■□□□□ 0.48
SMSP52788 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMSP52788 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMSP52788 RARRES2P10-201ENST00000564312 460 ntBASIC18.07■□□□□ 0.48
SMSP52788 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms