Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCNKAP51800 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCNKAP51800 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.99■□□□□ 0.63
CLCNKAP51800 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCNKAP51800 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.99■□□□□ 0.63
CLCNKAP51800 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.99■□□□□ 0.63
CLCNKAP51800 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.99■□□□□ 0.63
CLCNKAP51800 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCNKAP51800 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCNKAP51800 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCNKAP51800 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CLCNKAP51800 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCNKAP51800 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLCNKAP51800 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCNKAP51800 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCNKAP51800 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLCNKAP51800 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLCNKAP51800 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCNKAP51800 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCNKAP51800 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLCNKAP51800 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLCNKAP51800 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLCNKAP51800 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CLCNKAP51800 AC011506.1-201ENST00000474329 610 ntBASIC18.98■□□□□ 0.63
CLCNKAP51800 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLCNKAP51800 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCNKAP51800 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCNKAP51800 AL160286.2-201ENST00000567150 934 ntBASIC18.98■□□□□ 0.63
CLCNKAP51800 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.98■□□□□ 0.63
CLCNKAP51800 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCNKAP51800 AC130371.2-201ENST00000619443 611 ntBASIC18.98■□□□□ 0.63
CLCNKAP51800 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCNKAP51800 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCNKAP51800 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLCNKAP51800 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCNKAP51800 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCNKAP51800 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCNKAP51800 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLCNKAP51800 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCNKAP51800 AC079598.2-202ENST00000546624 1451 ntBASIC18.97■□□□□ 0.63
CLCNKAP51800 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCNKAP51800 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCNKAP51800 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCNKAP51800 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCNKAP51800 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCNKAP51800 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCNKAP51800 MMP23A-201ENST00000234610 1017 ntBASIC18.97■□□□□ 0.63
CLCNKAP51800 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLCNKAP51800 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCNKAP51800 FITM1-202ENST00000559294 800 ntBASIC18.97■□□□□ 0.63
CLCNKAP51800 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.97■□□□□ 0.63
CLCNKAP51800 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.97■□□□□ 0.63
CLCNKAP51800 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCNKAP51800 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.97■□□□□ 0.63
CLCNKAP51800 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCNKAP51800 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CLCNKAP51800 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.97■□□□□ 0.63
CLCNKAP51800 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCNKAP51800 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCNKAP51800 RCC2P6-201ENST00000526625 1557 ntBASIC18.97■□□□□ 0.63
CLCNKAP51800 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CLCNKAP51800 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.97■□□□□ 0.63
CLCNKAP51800 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CLCNKAP51800 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CLCNKAP51800 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CLCNKAP51800 AC125437.2-201ENST00000625180 2167 ntBASIC18.96■□□□□ 0.63
CLCNKAP51800 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 LINC01465-201ENST00000408887 1940 ntBASIC18.96■□□□□ 0.63
CLCNKAP51800 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 AC087499.1-201ENST00000418141 1075 ntBASIC18.96■□□□□ 0.63
CLCNKAP51800 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCNKAP51800 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
CLCNKAP51800 Z85996.1-201ENST00000494644 937 ntBASIC18.96■□□□□ 0.63
CLCNKAP51800 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.96■□□□□ 0.63
CLCNKAP51800 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.96■□□□□ 0.63
CLCNKAP51800 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCNKAP51800 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.96■□□□□ 0.63
CLCNKAP51800 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCNKAP51800 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 AFG3L1P-217ENST00000557444 2447 ntBASIC18.95■□□□□ 0.62
CLCNKAP51800 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCNKAP51800 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.95■□□□□ 0.62
CLCNKAP51800 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms