Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6CP51160 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6CP51160 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6CP51160 AP006587.1-201ENST00000534129 1502 ntBASIC20.88■□□□□ 0.93
PDE6CP51160 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6CP51160 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6CP51160 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PDE6CP51160 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6CP51160 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.88■□□□□ 0.93
PDE6CP51160 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6CP51160 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6CP51160 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PDE6CP51160 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PDE6CP51160 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PDE6CP51160 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6CP51160 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.88■□□□□ 0.93
PDE6CP51160 MIR4497-201ENST00000583208 89 ntBASIC20.88■□□□□ 0.93
PDE6CP51160 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.88■□□□□ 0.93
PDE6CP51160 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PDE6CP51160 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6CP51160 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6CP51160 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6CP51160 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6CP51160 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PDE6CP51160 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6CP51160 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6CP51160 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.87■□□□□ 0.93
PDE6CP51160 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PDE6CP51160 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6CP51160 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6CP51160 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6CP51160 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.87■□□□□ 0.93
PDE6CP51160 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6CP51160 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6CP51160 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6CP51160 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6CP51160 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6CP51160 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PDE6CP51160 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.87■□□□□ 0.93
PDE6CP51160 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.87■□□□□ 0.93
PDE6CP51160 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.87■□□□□ 0.93
PDE6CP51160 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.87■□□□□ 0.93
PDE6CP51160 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.87■□□□□ 0.93
PDE6CP51160 AC233702.5-201ENST00000584107 538 ntBASIC20.87■□□□□ 0.93
PDE6CP51160 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6CP51160 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.87■□□□□ 0.93
PDE6CP51160 Z82202.1-201ENST00000623446 1880 ntBASIC20.87■□□□□ 0.93
PDE6CP51160 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6CP51160 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6CP51160 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.87■□□□□ 0.93
PDE6CP51160 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.87■□□□□ 0.93
PDE6CP51160 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6CP51160 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.86■□□□□ 0.93
PDE6CP51160 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6CP51160 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6CP51160 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
PDE6CP51160 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.86■□□□□ 0.93
PDE6CP51160 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.86■□□□□ 0.93
PDE6CP51160 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6CP51160 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6CP51160 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6CP51160 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.86■□□□□ 0.93
PDE6CP51160 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PDE6CP51160 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.86■□□□□ 0.93
PDE6CP51160 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PDE6CP51160 RPS2P55-201ENST00000397318 883 ntBASIC20.86■□□□□ 0.93
PDE6CP51160 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PDE6CP51160 YBX1P10-201ENST00000444752 975 ntBASIC20.86■□□□□ 0.93
PDE6CP51160 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.86■□□□□ 0.93
PDE6CP51160 AC107956.1-201ENST00000494359 873 ntBASIC20.86■□□□□ 0.93
PDE6CP51160 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.86■□□□□ 0.93
PDE6CP51160 RARRES2P10-201ENST00000564312 460 ntBASIC20.86■□□□□ 0.93
PDE6CP51160 Z99916.2-201ENST00000604037 246 ntBASIC20.86■□□□□ 0.93
PDE6CP51160 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
PDE6CP51160 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6CP51160 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6CP51160 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PDE6CP51160 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6CP51160 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6CP51160 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6CP51160 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PDE6CP51160 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6CP51160 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PDE6CP51160 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6CP51160 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
PDE6CP51160 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.85■□□□□ 0.93
PDE6CP51160 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.85■□□□□ 0.93
PDE6CP51160 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6CP51160 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.85■□□□□ 0.93
PDE6CP51160 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6CP51160 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6CP51160 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.85■□□□□ 0.93
PDE6CP51160 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PDE6CP51160 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6CP51160 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6CP51160 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6CP51160 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6CP51160 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PDE6CP51160 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
PDE6CP51160 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms