Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
LHX2P50458 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX2P50458 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
LHX2P50458 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LHX2P50458 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX2P50458 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LHX2P50458 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LHX2P50458 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LHX2P50458 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
LHX2P50458 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.3■□□□□ 0.36
LHX2P50458 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX2P50458 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX2P50458 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.3■□□□□ 0.36
LHX2P50458 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.3■□□□□ 0.36
LHX2P50458 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.3■□□□□ 0.36
LHX2P50458 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.3■□□□□ 0.36
LHX2P50458 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX2P50458 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.3■□□□□ 0.36
LHX2P50458 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.3■□□□□ 0.36
LHX2P50458 MFAP1P1-201ENST00000442257 1255 ntBASIC17.3■□□□□ 0.36
LHX2P50458 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX2P50458 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.3■□□□□ 0.36
LHX2P50458 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.3■□□□□ 0.36
LHX2P50458 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.3■□□□□ 0.36
LHX2P50458 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.3■□□□□ 0.36
LHX2P50458 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX2P50458 AC145285.6-201ENST00000604632 637 ntBASIC17.3■□□□□ 0.36
LHX2P50458 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX2P50458 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.3■□□□□ 0.36
LHX2P50458 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX2P50458 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.3■□□□□ 0.36
LHX2P50458 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.3■□□□□ 0.36
LHX2P50458 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
LHX2P50458 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX2P50458 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.3■□□□□ 0.36
LHX2P50458 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.3■□□□□ 0.36
LHX2P50458 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX2P50458 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX2P50458 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.29■□□□□ 0.36
LHX2P50458 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX2P50458 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX2P50458 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX2P50458 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
LHX2P50458 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.29■□□□□ 0.36
LHX2P50458 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX2P50458 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.29■□□□□ 0.36
LHX2P50458 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.29■□□□□ 0.36
LHX2P50458 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LHX2P50458 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.29■□□□□ 0.36
LHX2P50458 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX2P50458 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX2P50458 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX2P50458 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX2P50458 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX2P50458 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX2P50458 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX2P50458 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX2P50458 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX2P50458 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX2P50458 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
LHX2P50458 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX2P50458 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.28■□□□□ 0.36
LHX2P50458 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.28■□□□□ 0.36
LHX2P50458 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.28■□□□□ 0.36
LHX2P50458 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.28■□□□□ 0.36
LHX2P50458 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.28■□□□□ 0.36
LHX2P50458 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.28■□□□□ 0.36
LHX2P50458 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.28■□□□□ 0.36
LHX2P50458 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.28■□□□□ 0.36
LHX2P50458 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LHX2P50458 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LHX2P50458 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.28■□□□□ 0.36
LHX2P50458 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX2P50458 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LHX2P50458 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX2P50458 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.28■□□□□ 0.36
LHX2P50458 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX2P50458 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.28■□□□□ 0.36
LHX2P50458 LINC01568-207ENST00000641790 1380 ntBASIC17.28■□□□□ 0.36
LHX2P50458 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LHX2P50458 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.27■□□□□ 0.36
LHX2P50458 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LHX2P50458 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LHX2P50458 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LHX2P50458 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.27■□□□□ 0.36
LHX2P50458 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LHX2P50458 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
LHX2P50458 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms