Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDC34P49427 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 PHGDH-210ENST00000641115 1638 ntBASIC15.28■□□□□ 0.04
CDC34P49427 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.28■□□□□ 0.04
CDC34P49427 AL133373.2-201ENST00000623187 2828 ntBASIC15.28■□□□□ 0.04
CDC34P49427 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC34P49427 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDC34P49427 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDC34P49427 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC34P49427 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.28■□□□□ 0.04
CDC34P49427 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC34P49427 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CDC34P49427 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC34P49427 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDC34P49427 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC34P49427 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDC34P49427 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC34P49427 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CDC34P49427 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDC34P49427 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDC34P49427 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.27■□□□□ 0.04
CDC34P49427 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CDC34P49427 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 Z98044.1-201ENST00000632503 1764 ntBASIC15.27■□□□□ 0.04
CDC34P49427 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
CDC34P49427 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC34P49427 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.27■□□□□ 0.04
CDC34P49427 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.27■□□□□ 0.04
CDC34P49427 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.27■□□□□ 0.04
CDC34P49427 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.27■□□□□ 0.03
CDC34P49427 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDC34P49427 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
CDC34P49427 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC34P49427 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.27■□□□□ 0.03
CDC34P49427 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.27■□□□□ 0.03
CDC34P49427 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC34P49427 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.27■□□□□ 0.03
CDC34P49427 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC34P49427 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CDC34P49427 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDC34P49427 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.27■□□□□ 0.03
CDC34P49427 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.03
CDC34P49427 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.27■□□□□ 0.03
CDC34P49427 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.27■□□□□ 0.03
CDC34P49427 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC34P49427 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC34P49427 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC34P49427 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CDC34P49427 AL031598.1-201ENST00000561511 1773 ntBASIC15.26■□□□□ 0.03
CDC34P49427 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC34P49427 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC34P49427 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDC34P49427 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC34P49427 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC34P49427 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC34P49427 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDC34P49427 TEX21P-204ENST00000641479 1693 ntBASIC15.26■□□□□ 0.03
CDC34P49427 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC34P49427 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDC34P49427 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC34P49427 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC34P49427 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC34P49427 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.26■□□□□ 0.03
CDC34P49427 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.26■□□□□ 0.03
CDC34P49427 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC34P49427 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC34P49427 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC34P49427 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDC34P49427 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC34P49427 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC34P49427 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC34P49427 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC34P49427 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms