Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.34■□□□□ 0.37
SOX6P35712 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SOX6P35712 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SOX6P35712 FAM21FP-204ENST00000608637 956 ntBASIC17.34■□□□□ 0.37
SOX6P35712 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.34■□□□□ 0.37
SOX6P35712 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.34■□□□□ 0.37
SOX6P35712 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SOX6P35712 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
SOX6P35712 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX6P35712 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SOX6P35712 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
SOX6P35712 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SOX6P35712 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SOX6P35712 MKRN4P-201ENST00000444706 1521 ntBASIC17.33■□□□□ 0.37
SOX6P35712 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
SOX6P35712 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.33■□□□□ 0.36
SOX6P35712 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SOX6P35712 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SOX6P35712 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX6P35712 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.33■□□□□ 0.36
SOX6P35712 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.33■□□□□ 0.36
SOX6P35712 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX6P35712 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.33■□□□□ 0.36
SOX6P35712 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX6P35712 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.33■□□□□ 0.36
SOX6P35712 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SOX6P35712 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SOX6P35712 AL031598.1-201ENST00000561511 1773 ntBASIC17.33■□□□□ 0.36
SOX6P35712 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX6P35712 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX6P35712 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX6P35712 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 KRT16P2-201ENST00000414673 1423 ntBASIC17.32■□□□□ 0.36
SOX6P35712 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.32■□□□□ 0.36
SOX6P35712 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SOX6P35712 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.32■□□□□ 0.36
SOX6P35712 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SOX6P35712 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SOX6P35712 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.32■□□□□ 0.36
SOX6P35712 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.32■□□□□ 0.36
SOX6P35712 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.32■□□□□ 0.36
SOX6P35712 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SOX6P35712 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX6P35712 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX6P35712 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX6P35712 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX6P35712 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX6P35712 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SOX6P35712 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.31■□□□□ 0.36
SOX6P35712 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SOX6P35712 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX6P35712 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.31■□□□□ 0.36
SOX6P35712 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.31■□□□□ 0.36
SOX6P35712 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX6P35712 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX6P35712 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SOX6P35712 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.31■□□□□ 0.36
SOX6P35712 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.31■□□□□ 0.36
SOX6P35712 IGHV3-19-201ENST00000521488 291 ntBASIC17.31■□□□□ 0.36
SOX6P35712 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 AC120498.10-201ENST00000621827 505 ntBASIC17.31■□□□□ 0.36
SOX6P35712 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SOX6P35712 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX6P35712 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SOX6P35712 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.31■□□□□ 0.36
SOX6P35712 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
SOX6P35712 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.3■□□□□ 0.36
SOX6P35712 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms