Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRNA3P32297 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA3P32297 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA3P32297 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHRNA3P32297 POM121L13P-201ENST00000422362 380 ntBASIC20.38■□□□□ 0.85
CHRNA3P32297 GCSHP5-201ENST00000443090 522 ntBASIC20.38■□□□□ 0.85
CHRNA3P32297 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.38■□□□□ 0.85
CHRNA3P32297 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNA3P32297 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA3P32297 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHRNA3P32297 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA3P32297 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA3P32297 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA3P32297 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA3P32297 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRNA3P32297 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
CHRNA3P32297 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CHRNA3P32297 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA3P32297 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHRNA3P32297 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA3P32297 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA3P32297 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA3P32297 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA3P32297 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.37■□□□□ 0.85
CHRNA3P32297 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRNA3P32297 AC142381.4-202ENST00000563973 229 ntBASIC20.37■□□□□ 0.85
CHRNA3P32297 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.37■□□□□ 0.85
CHRNA3P32297 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CHRNA3P32297 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA3P32297 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA3P32297 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA3P32297 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA3P32297 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA3P32297 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA3P32297 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA3P32297 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHRNA3P32297 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA3P32297 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRNA3P32297 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA3P32297 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA3P32297 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA3P32297 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA3P32297 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA3P32297 AL158047.1-201ENST00000445918 881 ntBASIC20.36■□□□□ 0.85
CHRNA3P32297 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.36■□□□□ 0.85
CHRNA3P32297 RPS2P52-201ENST00000469610 820 ntBASIC20.36■□□□□ 0.85
CHRNA3P32297 AC120498.8-201ENST00000614275 531 ntBASIC20.36■□□□□ 0.85
CHRNA3P32297 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA3P32297 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.36■□□□□ 0.85
CHRNA3P32297 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA3P32297 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CHRNA3P32297 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.36■□□□□ 0.85
CHRNA3P32297 AL138781.2-201ENST00000617896 1843 ntBASIC20.36■□□□□ 0.85
CHRNA3P32297 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA3P32297 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRNA3P32297 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRNA3P32297 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CHRNA3P32297 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA3P32297 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA3P32297 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA3P32297 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRNA3P32297 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.35■□□□□ 0.85
CHRNA3P32297 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA3P32297 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA3P32297 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRNA3P32297 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA3P32297 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.35■□□□□ 0.85
CHRNA3P32297 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.35■□□□□ 0.85
CHRNA3P32297 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.35■□□□□ 0.85
CHRNA3P32297 AC233263.1-201ENST00000578059 224 ntBASIC20.35■□□□□ 0.85
CHRNA3P32297 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA3P32297 AC069544.1-201ENST00000609399 999 ntBASIC20.35■□□□□ 0.85
CHRNA3P32297 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CHRNA3P32297 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRNA3P32297 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA3P32297 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.35■□□□□ 0.85
CHRNA3P32297 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CHRNA3P32297 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.35■□□□□ 0.85
CHRNA3P32297 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA3P32297 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA3P32297 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CHRNA3P32297 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA3P32297 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.34■□□□□ 0.85
CHRNA3P32297 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA3P32297 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA3P32297 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRNA3P32297 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRNA3P32297 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA3P32297 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA3P32297 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA3P32297 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CHRNA3P32297 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA3P32297 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.34■□□□□ 0.85
CHRNA3P32297 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRNA3P32297 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CHRNA3P32297 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA3P32297 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CHRNA3P32297 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRNA3P32297 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.34■□□□□ 0.85
CHRNA3P32297 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms