Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HOXC8P31273 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC8P31273 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC8P31273 TCF3P1-201ENST00000423021 1937 ntBASIC21.17■□□□□ 0.98
HOXC8P31273 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC8P31273 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC8P31273 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC8P31273 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC8P31273 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.16■□□□□ 0.98
HOXC8P31273 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.16■□□□□ 0.98
HOXC8P31273 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC8P31273 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.16■□□□□ 0.98
HOXC8P31273 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.16■□□□□ 0.98
HOXC8P31273 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.16■□□□□ 0.98
HOXC8P31273 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC8P31273 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC8P31273 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC8P31273 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.16■□□□□ 0.98
HOXC8P31273 AC009947.2-201ENST00000444014 672 ntBASIC21.16■□□□□ 0.98
HOXC8P31273 AL671277.2-201ENST00000458060 996 ntBASIC21.16■□□□□ 0.98
HOXC8P31273 AL359075.1-203ENST00000462729 1002 ntBASIC21.16■□□□□ 0.98
HOXC8P31273 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
HOXC8P31273 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HOXC8P31273 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.16■□□□□ 0.98
HOXC8P31273 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC8P31273 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC8P31273 ZNF815P-204ENST00000434898 1737 ntBASIC21.15■□□□□ 0.98
HOXC8P31273 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC8P31273 AC092667.1-201ENST00000434301 2586 ntBASIC21.15■□□□□ 0.98
HOXC8P31273 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC8P31273 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC8P31273 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HOXC8P31273 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC8P31273 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC8P31273 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXC8P31273 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.15■□□□□ 0.98
HOXC8P31273 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HOXC8P31273 AP000523.1-201ENST00000398242 1049 ntBASIC21.15■□□□□ 0.98
HOXC8P31273 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC8P31273 PCED1CP-201ENST00000419887 785 ntBASIC21.15■□□□□ 0.98
HOXC8P31273 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXC8P31273 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXC8P31273 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.15■□□□□ 0.98
HOXC8P31273 AC140113.3-201ENST00000605663 199 ntBASIC21.15■□□□□ 0.98
HOXC8P31273 HYMAI.1-201ENST00000620949 238 ntBASIC21.15■□□□□ 0.98
HOXC8P31273 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXC8P31273 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXC8P31273 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC8P31273 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC8P31273 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC8P31273 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
HOXC8P31273 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
HOXC8P31273 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.14■□□□□ 0.98
HOXC8P31273 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
HOXC8P31273 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HOXC8P31273 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.14■□□□□ 0.98
HOXC8P31273 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXC8P31273 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
HOXC8P31273 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC8P31273 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.14■□□□□ 0.97
HOXC8P31273 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC8P31273 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
HOXC8P31273 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC8P31273 TSPY23P-201ENST00000440136 739 ntBASIC21.14■□□□□ 0.97
HOXC8P31273 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.14■□□□□ 0.97
HOXC8P31273 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC8P31273 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
HOXC8P31273 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.14■□□□□ 0.97
HOXC8P31273 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXC8P31273 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC8P31273 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC8P31273 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC8P31273 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXC8P31273 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HOXC8P31273 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXC8P31273 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXC8P31273 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXC8P31273 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXC8P31273 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.13■□□□□ 0.97
HOXC8P31273 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
HOXC8P31273 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.13■□□□□ 0.97
HOXC8P31273 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXC8P31273 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXC8P31273 AC116407.4-201ENST00000623319 1061 ntBASIC21.13■□□□□ 0.97
HOXC8P31273 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HOXC8P31273 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HOXC8P31273 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXC8P31273 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms