Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
PDE4AP27815 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.32■■□□□ 1.48
PDE4AP27815 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDE4AP27815 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE4AP27815 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC24.31■■□□□ 1.48
PDE4AP27815 COMP-202ENST00000425807 2292 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE4AP27815 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE4AP27815 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PDE4AP27815 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.31■■□□□ 1.48
PDE4AP27815 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE4AP27815 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDE4AP27815 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE4AP27815 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE4AP27815 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE4AP27815 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE4AP27815 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE4AP27815 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE4AP27815 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDE4AP27815 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE4AP27815 AC124283.5-201ENST00000624661 1809 ntBASIC24.31■■□□□ 1.48
PDE4AP27815 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PDE4AP27815 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.3■■□□□ 1.48
PDE4AP27815 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.3■■□□□ 1.48
PDE4AP27815 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC24.3■■□□□ 1.48
PDE4AP27815 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.3■■□□□ 1.48
PDE4AP27815 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE4AP27815 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.3■■□□□ 1.48
PDE4AP27815 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.3■■□□□ 1.48
PDE4AP27815 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.3■■□□□ 1.48
PDE4AP27815 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.3■■□□□ 1.48
PDE4AP27815 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.3■■□□□ 1.48
PDE4AP27815 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.3■■□□□ 1.48
PDE4AP27815 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC24.3■■□□□ 1.48
PDE4AP27815 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC24.3■■□□□ 1.48
PDE4AP27815 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE4AP27815 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE4AP27815 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE4AP27815 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE4AP27815 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC24.3■■□□□ 1.48
PDE4AP27815 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE4AP27815 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE4AP27815 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
PDE4AP27815 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
PDE4AP27815 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PDE4AP27815 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDE4AP27815 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDE4AP27815 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.29■■□□□ 1.48
PDE4AP27815 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.29■■□□□ 1.48
PDE4AP27815 AL121832.2-201ENST00000610979 668 ntBASIC24.29■■□□□ 1.48
PDE4AP27815 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.29■■□□□ 1.48
PDE4AP27815 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
PDE4AP27815 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE4AP27815 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE4AP27815 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PDE4AP27815 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.29■■□□□ 1.48
PDE4AP27815 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE4AP27815 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE4AP27815 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE4AP27815 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE4AP27815 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC24.28■■□□□ 1.48
PDE4AP27815 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE4AP27815 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PDE4AP27815 AC098934.4-201ENST00000564127 592 ntBASIC24.28■■□□□ 1.48
PDE4AP27815 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
PDE4AP27815 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE4AP27815 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PDE4AP27815 TFP1-202ENST00000475455 1573 ntBASIC24.28■■□□□ 1.48
PDE4AP27815 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE4AP27815 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PDE4AP27815 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC24.28■■□□□ 1.48
PDE4AP27815 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE4AP27815 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE4AP27815 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
PDE4AP27815 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE4AP27815 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE4AP27815 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC24.27■■□□□ 1.48
PDE4AP27815 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PDE4AP27815 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE4AP27815 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE4AP27815 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE4AP27815 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE4AP27815 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.27■■□□□ 1.48
PDE4AP27815 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PDE4AP27815 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.27■■□□□ 1.48
PDE4AP27815 AC091874.3-201ENST00000512672 1195 ntBASIC24.27■■□□□ 1.48
PDE4AP27815 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.27■■□□□ 1.48
PDE4AP27815 AC005829.2-201ENST00000571422 1056 ntBASIC24.27■■□□□ 1.48
PDE4AP27815 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
PDE4AP27815 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.27■■□□□ 1.48
PDE4AP27815 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE4AP27815 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE4AP27815 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE4AP27815 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PDE4AP27815 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.27■■□□□ 1.48
PDE4AP27815 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PDE4AP27815 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
PDE4AP27815 AC079598.2-202ENST00000546624 1451 ntBASIC24.26■■□□□ 1.47
PDE4AP27815 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
PDE4AP27815 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDE4AP27815 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms