Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.3■□□□□ 0.365e-7■■■■□ 22.9
U2AF2P26368 TPM3-219ENST00000509409 1248 ntTSL 216.95■□□□□ 0.35e-7■■■■□ 22.9
U2AF2P26368 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.89■□□□□ 0.295e-7■■■■□ 22.9
U2AF2P26368 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.8■□□□□ 0.125e-7■■■■□ 22.9
U2AF2P26368 TPM3-223ENST00000611659 3149 ntTSL 3 BASIC14.33□□□□□ -0.115e-7■■■■□ 22.9
U2AF2P26368 TPM3-202ENST00000302206 741 ntTSL 3 BASIC13.91□□□□□ -0.185e-7■■■■□ 22.9
U2AF2P26368 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC13.63□□□□□ -0.235e-7■■■■□ 22.9
U2AF2P26368 TPM3-212ENST00000368533 3131 ntTSL 1 (best) BASIC12.51□□□□□ -0.415e-7■■■■□ 22.9
U2AF2P26368 TPM3-207ENST00000341372 2007 ntTSL 5 BASIC11.52□□□□□ -0.565e-7■■■■□ 22.9
U2AF2P26368 TPM3-210ENST00000368530 1523 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.65e-7■■■■□ 22.9
U2AF2P26368 TPM3-213ENST00000368545 2147 ntTSL 1 (best)9.97□□□□□ -0.815e-7■■■■□ 22.9
U2AF2P26368 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.845e-7■■■■□ 22.9
U2AF2P26368 TPM3-215ENST00000469717 4041 ntTSL 29.72□□□□□ -0.855e-7■■■■□ 22.9
U2AF2P26368 TPM3-203ENST00000312970 750 ntTSL 58.97□□□□□ -0.975e-7■■■■□ 22.9
U2AF2P26368 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.26■■□□□ 1.152e-15■■■■□ 22.9
U2AF2P26368 GATA2-205ENST00000492608 844 ntTSL 321.23■□□□□ 0.992e-15■■■■□ 22.9
U2AF2P26368 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.942e-15■■■■□ 22.9
U2AF2P26368 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.212e-15■■■■□ 22.9
U2AF2P26368 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.892e-9■■■■□ 22.9
U2AF2P26368 AIG1-204ENST00000367601 727 ntTSL 513.58□□□□□ -0.243e-6■■■■□ 22.9
U2AF2P26368 AIG1-205ENST00000447498 444 ntTSL 513.25□□□□□ -0.293e-6■■■■□ 22.9
U2AF2P26368 AIG1-202ENST00000357847 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.683e-6■■■■□ 22.9
U2AF2P26368 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC9.64□□□□□ -0.873e-6■■■■□ 22.9
U2AF2P26368 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.93□□□□□ -1.143e-6■■■■□ 22.9
U2AF2P26368 AIG1-206ENST00000458219 593 ntTSL 27.72□□□□□ -1.173e-6■■■■□ 22.9
U2AF2P26368 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.32□□□□□ -1.43e-6■■■■□ 22.9
U2AF2P26368 AIG1-207ENST00000470265 572 ntTSL 23.25□□□□□ -1.893e-6■■■■□ 22.9
U2AF2P26368 TRIM41-208ENST00000515499 914 ntTSL 323.64■■□□□ 1.378e-13■■■■□ 22.9
U2AF2P26368 TRIM41-209ENST00000515834 7015 ntTSL 1 (best)12.03□□□□□ -0.488e-13■■■■□ 22.9
U2AF2P26368 LYZ-201ENST00000261267 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.816e-7■■■■□ 22.9
U2AF2P26368 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.66□□□□□ -1.826e-7■■■■□ 22.9
U2AF2P26368 ECI2-208ENST00000478266 1133 ntTSL 518.59■□□□□ 0.573e-7■■■■□ 22.9
U2AF2P26368 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.093e-7■■■■□ 22.9
U2AF2P26368 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC15.38■□□□□ 0.053e-7■■■■□ 22.9
U2AF2P26368 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC14.58□□□□□ -0.083e-7■■■■□ 22.9
U2AF2P26368 ECI2-205ENST00000464057 2122 ntTSL 214.23□□□□□ -0.133e-7■■■■□ 22.9
U2AF2P26368 ECI2-203ENST00000380120 1469 ntTSL 213.1□□□□□ -0.313e-7■■■■□ 22.9
U2AF2P26368 ECI2-211ENST00000496241 1451 ntTSL 1 (best)12.86□□□□□ -0.353e-7■■■■□ 22.9
U2AF2P26368 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC8.34□□□□□ -1.073e-7■■■■□ 22.9
U2AF2P26368 DHX9-206ENST00000483416 814 ntTSL 518.41■□□□□ 0.543e-6■■■■□ 22.9
U2AF2P26368 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.81e-6■■■■□ 22.9
U2AF2P26368 SMARCC1-204ENST00000462198 785 ntTSL 26.59□□□□□ -1.351e-6■■■■□ 22.8
U2AF2P26368 POLG2-209ENST00000585104 271 ntTSL 33.21□□□□□ -1.96e-16■■■■□ 22.8
U2AF2P26368 SLC25A36-212ENST00000513887 578 ntTSL 316.34■□□□□ 0.215e-8■■■■□ 22.8
U2AF2P26368 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.785e-7■■■■□ 22.8
U2AF2P26368 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.285e-7■■■■□ 22.8
U2AF2P26368 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)17.03■□□□□ 0.321e-6■■■■□ 22.8
U2AF2P26368 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.431e-6■■■■□ 22.8
U2AF2P26368 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.891e-6■■■■□ 22.8
U2AF2P26368 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.361e-23■■■■□ 22.8
U2AF2P26368 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.23■■□□□ 1.311e-23■■■■□ 22.8
U2AF2P26368 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.7■■□□□ 1.221e-23■■■■□ 22.8
U2AF2P26368 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.62■■□□□ 1.211e-23■■■■□ 22.8
U2AF2P26368 INTS11-235ENST00000527719 750 ntTSL 522.08■■□□□ 1.131e-23■■■■□ 22.8
U2AF2P26368 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.45■■□□□ 1.021e-23■■■■□ 22.8
U2AF2P26368 INTS11-230ENST00000526332 579 ntTSL 421.4■■□□□ 1.021e-23■■■■□ 22.8
U2AF2P26368 INTS11-218ENST00000488042 1134 ntTSL 220.3■□□□□ 0.841e-23■■■■□ 22.8
U2AF2P26368 INTS11-237ENST00000530031 800 ntTSL 519.96■□□□□ 0.791e-23■■■■□ 22.8
U2AF2P26368 INTS11-207ENST00000434694 1056 ntTSL 519.92■□□□□ 0.781e-23■■■■□ 22.8
U2AF2P26368 INTS11-243ENST00000532772 1618 ntTSL 519.41■□□□□ 0.71e-23■■■■□ 22.8
U2AF2P26368 INTS11-242ENST00000531377 816 ntTSL 519.2■□□□□ 0.661e-23■■■■□ 22.8
U2AF2P26368 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.98■□□□□ 0.631e-23■■■■□ 22.8
U2AF2P26368 INTS11-210ENST00000458452 2571 ntTSL 218.89■□□□□ 0.621e-23■■■■□ 22.8
U2AF2P26368 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.86■□□□□ 0.611e-23■■■■□ 22.8
U2AF2P26368 INTS11-232ENST00000526904 551 ntTSL 418.73■□□□□ 0.591e-23■■■■□ 22.8
U2AF2P26368 INTS11-233ENST00000527098 2004 ntTSL 218.63■□□□□ 0.571e-23■■■■□ 22.8
U2AF2P26368 INTS11-201ENST00000323275 2450 ntTSL 1 (best)18.62■□□□□ 0.571e-23■■■■□ 22.8
U2AF2P26368 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.32■□□□□ 0.361e-23■■■■□ 22.8
U2AF2P26368 INTS11-236ENST00000528879 1524 ntTSL 517.12■□□□□ 0.331e-23■■■■□ 22.8
U2AF2P26368 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.91■□□□□ 0.31e-23■■■■□ 22.8
U2AF2P26368 INTS11-206ENST00000430786 849 ntTSL 516.65■□□□□ 0.261e-23■■■■□ 22.8
U2AF2P26368 INTS11-227ENST00000525603 738 ntTSL 315.94■□□□□ 0.141e-23■■■■□ 22.8
U2AF2P26368 INTS11-229ENST00000526113 591 ntTSL 515.66■□□□□ 0.11e-23■■■■□ 22.8
U2AF2P26368 INTS11-231ENST00000526797 659 ntTSL 413.61□□□□□ -0.231e-23■■■■□ 22.8
U2AF2P26368 AL139287.1-201ENST00000444968 386 ntTSL 3 BASIC11.19□□□□□ -0.621e-23■■■■□ 22.8
U2AF2P26368 AL157392.3-201ENST00000601075 833 ntTSL 5 BASIC14.34□□□□□ -0.113e-8■■■■□ 22.8
U2AF2P26368 AL157392.5-202ENST00000595538 732 ntTSL 510.66□□□□□ -0.73e-8■■■■□ 22.8
U2AF2P26368 ZFYVE16-204ENST00000509558 637 ntTSL 310.19□□□□□ -0.783e-8■■■■□ 22.8
U2AF2P26368 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC8.8□□□□□ -13e-8■■■■□ 22.8
U2AF2P26368 AL157392.5-203ENST00000596044 761 ntTSL 56.56□□□□□ -1.363e-8■■■■□ 22.8
U2AF2P26368 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.04□□□□□ -1.763e-8■■■■□ 22.8
U2AF2P26368 ZFYVE16-208ENST00000511050 545 ntTSL 30.81□□□□□ -2.283e-8■■■■□ 22.8
U2AF2P26368 MKLN1-205ENST00000446815 551 ntTSL 420.08■□□□□ 0.817e-7■■■■□ 22.8
U2AF2P26368 MKLN1-202ENST00000416992 864 ntTSL 38.39□□□□□ -1.077e-7■■■■□ 22.8
U2AF2P26368 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.02□□□□□ -1.457e-7■■■■□ 22.8
U2AF2P26368 HIST1H2BN-202ENST00000449538 715 ntTSL 1 (best)19.62■□□□□ 0.731e-6■■■■□ 22.8
U2AF2P26368 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.171e-6■■■■□ 22.8
U2AF2P26368 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC9.14□□□□□ -0.951e-6■■■■□ 22.8
U2AF2P26368 ZNF224-202ENST00000586978 510 ntTSL 216.25■□□□□ 0.191e-7■■■■□ 22.8
U2AF2P26368 ZNF224-206ENST00000590614 562 ntTSL 411.99□□□□□ -0.491e-7■■■■□ 22.8
U2AF2P26368 ZNF224-204ENST00000589680 547 ntTSL 311.82□□□□□ -0.521e-7■■■■□ 22.8
U2AF2P26368 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.251e-7■■■■□ 22.8
U2AF2P26368 ZNF224-205ENST00000589870 614 ntTSL 36.9□□□□□ -1.31e-7■■■■□ 22.8
U2AF2P26368 EMSY-202ENST00000427574 2415 ntTSL 1 (best)9.75□□□□□ -0.853e-8■■■■□ 22.8
U2AF2P26368 EMSY-216ENST00000533972 452 ntTSL 38.88□□□□□ -0.993e-8■■■■□ 22.8
U2AF2P26368 BIRC6-202ENST00000431454 508 ntTSL 38.04□□□□□ -1.121e-12■■■■□ 22.8
U2AF2P26368 PHIP-202ENST00000479165 5694 ntTSL 1 (best)1.35□□□□□ -2.198e-13■■■■□ 22.8
U2AF2P26368 MTHFD2-207ENST00000488086 483 ntTSL 29.96□□□□□ -0.822e-7■■■■□ 22.8
U2AF2P26368 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.739e-9■■■■□ 22.8
U2AF2P26368 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.3□□□□□ -1.881e-9■■■■□ 22.8
Retrieved 100 of 36,523 protein–RNA pairs in 204.6 ms