RNA–Protein interactions for RNA: ENST00000511050.5

ZFYVE16-208, Transcript of zinc finger FYVE-type containing 16, humanhuman

TSL 3

Gene ZFYVE16, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-208ENST00000511050 AEBP2Q6ZN18 517 aaPredicted RBP33.14■■■□□ 2.9
ZFYVE16-208ENST00000511050 CHIC1Q5VXU3 224 aa31.77■■■□□ 2.68
ZFYVE16-208ENST00000511050 SENP3Q9H4L4 574 aaPredicted RBP28.21■■■□□ 2.11
ZFYVE16-208ENST00000511050 PHF23Q9BUL5 403 aaPredicted RBP27.88■■■□□ 2.05
ZFYVE16-208ENST00000511050 FOXD1Q16676 465 aa26.26■■□□□ 1.79
ZFYVE16-208ENST00000511050 PLPPR3Q6T4P5 718 aa25.49■■□□□ 1.67
ZFYVE16-208ENST00000511050 PPP6R1Q9UPN7 881 aa24.78■■□□□ 1.56
ZFYVE16-208ENST00000511050 ADRA2BP18089 450 aa24.69■■□□□ 1.54
ZFYVE16-208ENST00000511050 PIAS4Q8N2W9 510 aaPredicted RBP24.57■■□□□ 1.52
ZFYVE16-208ENST00000511050 MSH5O43196 834 aa24.46■■□□□ 1.51
ZFYVE16-208ENST00000511050 POTEDQ86YR6 584 aa23.37■■□□□ 1.33
ZFYVE16-208ENST00000511050 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
ZFYVE16-208ENST00000511050 MAPK8IP2Q13387 824 aaPredicted RBP22.58■■□□□ 1.21
ZFYVE16-208ENST00000511050 DMRT2Q9Y5R5 561 aa22.44■■□□□ 1.18
ZFYVE16-208ENST00000511050 PPP4R3CPQ6ZMV5 832 aa22.38■■□□□ 1.17
ZFYVE16-208ENST00000511050 CNKSR2Q8WXI2 1034 aa21.91■■□□□ 1.1
ZFYVE16-208ENST00000511050 HOXD11P31277 338 aaPredicted RBP21.76■■□□□ 1.07
ZFYVE16-208ENST00000511050 RNF216Q9NWF9 866 aaPredicted RBP21.65■■□□□ 1.06
ZFYVE16-208ENST00000511050 NCBP3Q53F19 620 aaKnown RBP21.59■■□□□ 1.05
ZFYVE16-208ENST00000511050 DCAF8L1A6NGE4 600 aa21.36■■□□□ 1.01
ZFYVE16-208ENST00000511050 NPM3O75607 178 aaKnown RBP21.3■■□□□ 1
ZFYVE16-208ENST00000511050 KCNA4P22459 653 aa21.14■□□□□ 0.97
ZFYVE16-208ENST00000511050 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
ZFYVE16-208ENST00000511050 RNF39Q9H2S5 420 aa20.92■□□□□ 0.94
ZFYVE16-208ENST00000511050 CACNB1Q02641 598 aaPredicted RBP20.75■□□□□ 0.91
ZFYVE16-208ENST00000511050 C1QBPQ07021 282 aaKnown RBP20.63■□□□□ 0.89
ZFYVE16-208ENST00000511050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.62■□□□□ 0.895e-7■□□□□ 9.3
ZFYVE16-208ENST00000511050 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
ZFYVE16-208ENST00000511050 U3KPZ7 1027 aaPredicted RBP20.29■□□□□ 0.84
ZFYVE16-208ENST00000511050 SLC4A1APQ9BWU0 796 aaKnown RBP20■□□□□ 0.79
ZFYVE16-208ENST00000511050 SPINK5Q9NQ38 1064 aaPredicted RBP19.87■□□□□ 0.77
ZFYVE16-208ENST00000511050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
ZFYVE16-208ENST00000511050 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
ZFYVE16-208ENST00000511050 CAPN15O75808 1086 aa19.79■□□□□ 0.76
ZFYVE16-208ENST00000511050 APLP2Q06481 763 aa19.73■□□□□ 0.75
ZFYVE16-208ENST00000511050 SAMD1Q6SPF0 538 aaPredicted RBP19.7■□□□□ 0.74
ZFYVE16-208ENST00000511050 MYCNP04198 464 aaPredicted RBP19.69■□□□□ 0.74
ZFYVE16-208ENST00000511050 DSG3P32926 999 aa19.68■□□□□ 0.74
ZFYVE16-208ENST00000511050 FOXD4L1Q9NU39 408 aa19.64■□□□□ 0.73
ZFYVE16-208ENST00000511050 ZNF219Q9P2Y4 722 aaPredicted RBP19.57■□□□□ 0.72
ZFYVE16-208ENST00000511050 TRHP20396 242 aaPredicted RBP19.53■□□□□ 0.72
ZFYVE16-208ENST00000511050 ZBTB22O15209 634 aa19.46■□□□□ 0.71
ZFYVE16-208ENST00000511050 ABCB7O75027 752 aa19.34■□□□□ 0.69
ZFYVE16-208ENST00000511050 ATF5Q9Y2D1 282 aaPredicted RBP19.21■□□□□ 0.67
ZFYVE16-208ENST00000511050 POLA2Q14181 598 aa19.12■□□□□ 0.65
ZFYVE16-208ENST00000511050 ATXN8OSP0DMR3 200 aa19.06■□□□□ 0.64
ZFYVE16-208ENST00000511050 CSRNP3Q8WYN3 585 aa18.83■□□□□ 0.6
ZFYVE16-208ENST00000511050 ZBTB12Q9Y330 459 aaPredicted RBP18.78■□□□□ 0.6
ZFYVE16-208ENST00000511050 RBM42Q9BTD8 480 aaKnown RBP18.75■□□□□ 0.59
ZFYVE16-208ENST00000511050 EHMT2Q96KQ7 1210 aa18.63■□□□□ 0.57
ZFYVE16-208ENST00000511050 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
ZFYVE16-208ENST00000511050 FBLN2P98095 1184 aa18.41■□□□□ 0.54
ZFYVE16-208ENST00000511050 AKT1S1Q96B36 256 aa18.4■□□□□ 0.54
ZFYVE16-208ENST00000511050 MKRN4PQ13434 485 aaPredicted RBP18.36■□□□□ 0.53
ZFYVE16-208ENST00000511050 POTEHQ6S545 545 aa18.36■□□□□ 0.53
ZFYVE16-208ENST00000511050 SPDYE2BA6NHP3 402 aa18.23■□□□□ 0.51
ZFYVE16-208ENST00000511050 SPDYE6P0CI01 402 aa18.23■□□□□ 0.51
ZFYVE16-208ENST00000511050 SPDYE2Q495Y8 402 aa18.23■□□□□ 0.51
ZFYVE16-208ENST00000511050 CHRDL2Q6WN34 429 aa18.22■□□□□ 0.51
ZFYVE16-208ENST00000511050 REM2Q8IYK8 340 aaPredicted RBP18.21■□□□□ 0.51
ZFYVE16-208ENST00000511050 SSUH2Q9Y2M2 353 aa18.05■□□□□ 0.48
ZFYVE16-208ENST00000511050 ZNF692Q9BU19 519 aaPredicted RBP18.02■□□□□ 0.48
ZFYVE16-208ENST00000511050 PITPNM1O00562 1244 aa18■□□□□ 0.47
ZFYVE16-208ENST00000511050 PIP4P2Q8N4L2 257 aa17.86■□□□□ 0.45
ZFYVE16-208ENST00000511050 FXR2P51116 673 aaKnown RBP eCLIP17.84■□□□□ 0.45
ZFYVE16-208ENST00000511050 SPDYE1Q8NFV5 336 aaPredicted RBP17.82■□□□□ 0.44
ZFYVE16-208ENST00000511050 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
ZFYVE16-208ENST00000511050 CLEC11AQ9Y240 323 aa17.71■□□□□ 0.43
ZFYVE16-208ENST00000511050 SPDYE4A6NLX3 237 aa17.61■□□□□ 0.41
ZFYVE16-208ENST00000511050 PRKAR2AP13861 404 aaKnown RBP17.52■□□□□ 0.4
ZFYVE16-208ENST00000511050 PRR29P0C7W0 189 aa17.5■□□□□ 0.39
ZFYVE16-208ENST00000511050 HAX1O00165 279 aa17.4■□□□□ 0.38
ZFYVE16-208ENST00000511050 CHADLQ6NUI6 762 aa17.36■□□□□ 0.37
ZFYVE16-208ENST00000511050 SP7Q8TDD2 431 aaPredicted RBP17.36■□□□□ 0.37
ZFYVE16-208ENST00000511050 STAG3Q9UJ98 1225 aa17.36■□□□□ 0.37
ZFYVE16-208ENST00000511050 PROM2Q8N271 834 aa17.32■□□□□ 0.36
ZFYVE16-208ENST00000511050 EVX2Q03828 476 aa17.26■□□□□ 0.35
ZFYVE16-208ENST00000511050 C19orf67A6NJJ6 358 aa17.25■□□□□ 0.35
ZFYVE16-208ENST00000511050 FARP1Q9Y4F1 1045 aaPredicted RBP17.19■□□□□ 0.34
ZFYVE16-208ENST00000511050 CREBZFQ9NS37 354 aa17.18■□□□□ 0.34
ZFYVE16-208ENST00000511050 FKBP8Q14318 412 aa17■□□□□ 0.31
ZFYVE16-208ENST00000511050 CD44P16070 742 aaKnown RBP16.98■□□□□ 0.31
ZFYVE16-208ENST00000511050 MNX1P50219 401 aaPredicted RBP16.96■□□□□ 0.31
ZFYVE16-208ENST00000511050 GABBR2O75899 941 aa16.89■□□□□ 0.29
ZFYVE16-208ENST00000511050 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
ZFYVE16-208ENST00000511050 CLCN6P51797 869 aa16.79■□□□□ 0.28
ZFYVE16-208ENST00000511050 ZNF579Q8NAF0 562 aaKnown RBP16.79■□□□□ 0.28
ZFYVE16-208ENST00000511050 ZRANB1Q9UGI0 708 aa16.78■□□□□ 0.28
ZFYVE16-208ENST00000511050 MIER1Q8N108 512 aa16.73■□□□□ 0.27
ZFYVE16-208ENST00000511050 PAK3O75914 559 aaPredicted RBP16.69■□□□□ 0.26
ZFYVE16-208ENST00000511050 PLEKHG5O94827 1062 aa16.68■□□□□ 0.26
ZFYVE16-208ENST00000511050 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
ZFYVE16-208ENST00000511050 FBXO3Q9UK99 471 aa16.6■□□□□ 0.25
ZFYVE16-208ENST00000511050 PHF12Q96QT6 1004 aa16.57■□□□□ 0.24
ZFYVE16-208ENST00000511050 POTEIP0CG38 1075 aa16.56■□□□□ 0.24
ZFYVE16-208ENST00000511050 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
ZFYVE16-208ENST00000511050 GALR2O43603 387 aaPredicted RBP16.52■□□□□ 0.24
ZFYVE16-208ENST00000511050 TSPYL2Q9H2G4 693 aaPredicted RBP16.5■□□□□ 0.23
ZFYVE16-208ENST00000511050 CCDC61Q9Y6R9 512 aa16.5■□□□□ 0.23
ZFYVE16-208ENST00000511050 RASEFQ8IZ41 740 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms