Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDH3P22223 TSPY7P-201ENST00000431358 1114 ntBASIC18.92■□□□□ 0.62
CDH3P22223 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH3P22223 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH3P22223 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.92■□□□□ 0.62
CDH3P22223 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.92■□□□□ 0.62
CDH3P22223 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH3P22223 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH3P22223 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH3P22223 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CDH3P22223 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH3P22223 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH3P22223 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH3P22223 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH3P22223 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.92■□□□□ 0.62
CDH3P22223 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH3P22223 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH3P22223 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH3P22223 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH3P22223 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDH3P22223 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH3P22223 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH3P22223 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CDH3P22223 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH3P22223 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH3P22223 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH3P22223 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH3P22223 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH3P22223 KRT17P2-201ENST00000300992 1314 ntBASIC18.91■□□□□ 0.62
CDH3P22223 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH3P22223 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH3P22223 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CDH3P22223 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH3P22223 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CDH3P22223 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.9■□□□□ 0.62
CDH3P22223 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH3P22223 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.9■□□□□ 0.62
CDH3P22223 TUBB8P6-201ENST00000436895 1288 ntBASIC18.9■□□□□ 0.62
CDH3P22223 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.9■□□□□ 0.62
CDH3P22223 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH3P22223 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH3P22223 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.9■□□□□ 0.62
CDH3P22223 MIR4785-201ENST00000585005 73 ntBASIC18.9■□□□□ 0.62
CDH3P22223 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 AL162377.1-201ENST00000618844 1793 ntBASIC18.9■□□□□ 0.62
CDH3P22223 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH3P22223 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH3P22223 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH3P22223 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
CDH3P22223 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CDH3P22223 AP001271.2-201ENST00000624018 1556 ntBASIC18.89■□□□□ 0.62
CDH3P22223 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.89■□□□□ 0.62
CDH3P22223 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH3P22223 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDH3P22223 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH3P22223 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH3P22223 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH3P22223 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CDH3P22223 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH3P22223 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH3P22223 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.89■□□□□ 0.61
CDH3P22223 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.89■□□□□ 0.61
CDH3P22223 AC073195.1-201ENST00000607241 877 ntBASIC18.89■□□□□ 0.61
CDH3P22223 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDH3P22223 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDH3P22223 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDH3P22223 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH3P22223 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDH3P22223 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH3P22223 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH3P22223 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH3P22223 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms