Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT4P19013 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT4P19013 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT4P19013 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
KRT4P19013 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.4■□□□□ 0.7
KRT4P19013 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT4P19013 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT4P19013 ZNF815P-204ENST00000434898 1737 ntBASIC19.4■□□□□ 0.7
KRT4P19013 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT4P19013 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT4P19013 AL031598.1-201ENST00000561511 1773 ntBASIC19.4■□□□□ 0.7
KRT4P19013 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT4P19013 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT4P19013 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT4P19013 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
KRT4P19013 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT4P19013 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT4P19013 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT4P19013 DUX4L16-201ENST00000555130 1264 ntBASIC19.4■□□□□ 0.7
KRT4P19013 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
KRT4P19013 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT4P19013 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
KRT4P19013 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT4P19013 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT4P19013 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT4P19013 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT4P19013 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT4P19013 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.4■□□□□ 0.7
KRT4P19013 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT4P19013 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT4P19013 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT4P19013 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
KRT4P19013 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT4P19013 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT4P19013 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.39■□□□□ 0.7
KRT4P19013 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.39■□□□□ 0.7
KRT4P19013 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT4P19013 AC090164.3-201ENST00000610780 2143 ntBASIC19.39■□□□□ 0.69
KRT4P19013 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT4P19013 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.39■□□□□ 0.69
KRT4P19013 AC069236.1-201ENST00000604339 616 ntBASIC19.39■□□□□ 0.69
KRT4P19013 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
KRT4P19013 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 AC079598.2-202ENST00000546624 1451 ntBASIC19.39■□□□□ 0.69
KRT4P19013 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KRT4P19013 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT4P19013 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT4P19013 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT4P19013 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 FP475955.4-201ENST00000623131 1990 ntBASIC19.39■□□□□ 0.69
KRT4P19013 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT4P19013 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
KRT4P19013 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
KRT4P19013 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT4P19013 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRT4P19013 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT4P19013 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT4P19013 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
KRT4P19013 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT4P19013 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRT4P19013 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
KRT4P19013 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.38■□□□□ 0.69
KRT4P19013 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
KRT4P19013 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT4P19013 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT4P19013 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT4P19013 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT4P19013 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
KRT4P19013 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT4P19013 AC137761.2-201ENST00000561729 223 ntBASIC19.38■□□□□ 0.69
KRT4P19013 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT4P19013 AC145350.3-201ENST00000569033 163 ntBASIC19.38■□□□□ 0.69
KRT4P19013 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT4P19013 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRT4P19013 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT4P19013 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.38■□□□□ 0.69
KRT4P19013 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT4P19013 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
KRT4P19013 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT4P19013 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT4P19013 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT4P19013 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KRT4P19013 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT4P19013 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT4P19013 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT4P19013 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT4P19013 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
KRT4P19013 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT4P19013 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms