Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN1P18031 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN1P18031 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN1P18031 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN1P18031 AFG3L1P-217ENST00000557444 2447 ntBASIC20.51■□□□□ 0.87
PTPN1P18031 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
PTPN1P18031 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PTPN1P18031 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN1P18031 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN1P18031 AP000525.1-201ENST00000608286 694 ntBASIC20.51■□□□□ 0.87
PTPN1P18031 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPN1P18031 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PTPN1P18031 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN1P18031 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN1P18031 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
PTPN1P18031 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
PTPN1P18031 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PTPN1P18031 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PTPN1P18031 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN1P18031 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN1P18031 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN1P18031 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN1P18031 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN1P18031 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN1P18031 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN1P18031 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PTPN1P18031 AC091390.4-202ENST00000476426 537 ntBASIC20.5■□□□□ 0.87
PTPN1P18031 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN1P18031 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.5■□□□□ 0.87
PTPN1P18031 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.5■□□□□ 0.87
PTPN1P18031 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN1P18031 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN1P18031 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PTPN1P18031 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.5■□□□□ 0.87
PTPN1P18031 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PTPN1P18031 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN1P18031 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN1P18031 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PTPN1P18031 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PTPN1P18031 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PTPN1P18031 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN1P18031 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN1P18031 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN1P18031 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN1P18031 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.49■□□□□ 0.87
PTPN1P18031 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN1P18031 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN1P18031 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN1P18031 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN1P18031 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN1P18031 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN1P18031 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN1P18031 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN1P18031 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN1P18031 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN1P18031 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN1P18031 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN1P18031 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN1P18031 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN1P18031 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 KRT8P41-201ENST00000533985 1514 ntBASIC20.48■□□□□ 0.87
PTPN1P18031 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
PTPN1P18031 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.48■□□□□ 0.87
PTPN1P18031 MMP23A-201ENST00000234610 1017 ntBASIC20.48■□□□□ 0.87
PTPN1P18031 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PTPN1P18031 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN1P18031 MIR1238-201ENST00000408483 83 ntBASIC20.48■□□□□ 0.87
PTPN1P18031 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN1P18031 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN1P18031 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN1P18031 AP000692.2-201ENST00000608391 879 ntBASIC20.48■□□□□ 0.87
PTPN1P18031 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN1P18031 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN1P18031 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN1P18031 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PTPN1P18031 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN1P18031 RNF165-205ENST00000588679 2904 ntBASIC20.47■□□□□ 0.87
PTPN1P18031 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN1P18031 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.47■□□□□ 0.87
PTPN1P18031 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PTPN1P18031 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN1P18031 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN1P18031 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN1P18031 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN1P18031 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN1P18031 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
PTPN1P18031 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms