Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.28■□□□□ 0.52
NCK1P16333 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.28■□□□□ 0.52
NCK1P16333 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.28■□□□□ 0.52
NCK1P16333 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCK1P16333 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCK1P16333 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NCK1P16333 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCK1P16333 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCK1P16333 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
NCK1P16333 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.27■□□□□ 0.52
NCK1P16333 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCK1P16333 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.27■□□□□ 0.52
NCK1P16333 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.27■□□□□ 0.52
NCK1P16333 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCK1P16333 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCK1P16333 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCK1P16333 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.27■□□□□ 0.52
NCK1P16333 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCK1P16333 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.27■□□□□ 0.52
NCK1P16333 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.27■□□□□ 0.52
NCK1P16333 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NCK1P16333 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.27■□□□□ 0.52
NCK1P16333 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.27■□□□□ 0.52
NCK1P16333 AC090164.3-201ENST00000610780 2143 ntBASIC18.27■□□□□ 0.52
NCK1P16333 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NCK1P16333 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCK1P16333 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NCK1P16333 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NCK1P16333 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
NCK1P16333 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
NCK1P16333 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NCK1P16333 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NCK1P16333 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCK1P16333 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NCK1P16333 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCK1P16333 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.26■□□□□ 0.51
NCK1P16333 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NCK1P16333 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.26■□□□□ 0.51
NCK1P16333 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NCK1P16333 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NCK1P16333 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCK1P16333 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCK1P16333 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NCK1P16333 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCK1P16333 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCK1P16333 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NCK1P16333 CNN2P6-201ENST00000439038 900 ntBASIC18.26■□□□□ 0.51
NCK1P16333 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.26■□□□□ 0.51
NCK1P16333 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.26■□□□□ 0.51
NCK1P16333 C2orf69P4-201ENST00000565394 541 ntBASIC18.26■□□□□ 0.51
NCK1P16333 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.26■□□□□ 0.51
NCK1P16333 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCK1P16333 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.26■□□□□ 0.51
NCK1P16333 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.26■□□□□ 0.51
NCK1P16333 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.26■□□□□ 0.51
NCK1P16333 AL031598.1-201ENST00000561511 1773 ntBASIC18.26■□□□□ 0.51
NCK1P16333 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCK1P16333 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCK1P16333 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.26■□□□□ 0.51
NCK1P16333 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCK1P16333 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NCK1P16333 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCK1P16333 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
NCK1P16333 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.26■□□□□ 0.51
NCK1P16333 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCK1P16333 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.25■□□□□ 0.51
NCK1P16333 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.25■□□□□ 0.51
NCK1P16333 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NCK1P16333 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCK1P16333 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.25■□□□□ 0.51
NCK1P16333 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NCK1P16333 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCK1P16333 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCK1P16333 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCK1P16333 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCK1P16333 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCK1P16333 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCK1P16333 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.25■□□□□ 0.51
NCK1P16333 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.25■□□□□ 0.51
NCK1P16333 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCK1P16333 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCK1P16333 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCK1P16333 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCK1P16333 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCK1P16333 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCK1P16333 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCK1P16333 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.24■□□□□ 0.51
NCK1P16333 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.24■□□□□ 0.51
NCK1P16333 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
NCK1P16333 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.24■□□□□ 0.51
NCK1P16333 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.24■□□□□ 0.51
NCK1P16333 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCK1P16333 ZNF815P-204ENST00000434898 1737 ntBASIC18.24■□□□□ 0.51
NCK1P16333 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.24■□□□□ 0.51
NCK1P16333 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms