Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PDGFRAP16234 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDGFRAP16234 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFRAP16234 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDGFRAP16234 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFRAP16234 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFRAP16234 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFRAP16234 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.31■□□□□ 0.84
PDGFRAP16234 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFRAP16234 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFRAP16234 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.31■□□□□ 0.84
PDGFRAP16234 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.31■□□□□ 0.84
PDGFRAP16234 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PDGFRAP16234 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.31■□□□□ 0.84
PDGFRAP16234 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.31■□□□□ 0.84
PDGFRAP16234 KRT16P5-201ENST00000455284 522 ntBASIC20.31■□□□□ 0.84
PDGFRAP16234 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
PDGFRAP16234 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.31■□□□□ 0.84
PDGFRAP16234 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFRAP16234 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.31■□□□□ 0.84
PDGFRAP16234 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.31■□□□□ 0.84
PDGFRAP16234 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDGFRAP16234 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.31■□□□□ 0.84
PDGFRAP16234 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.31■□□□□ 0.84
PDGFRAP16234 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.31■□□□□ 0.84
PDGFRAP16234 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.31■□□□□ 0.84
PDGFRAP16234 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFRAP16234 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
PDGFRAP16234 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.3■□□□□ 0.84
PDGFRAP16234 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFRAP16234 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PDGFRAP16234 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.3■□□□□ 0.84
PDGFRAP16234 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.3■□□□□ 0.84
PDGFRAP16234 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PDGFRAP16234 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.3■□□□□ 0.84
PDGFRAP16234 AC008550.1-201ENST00000511500 884 ntBASIC20.3■□□□□ 0.84
PDGFRAP16234 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFRAP16234 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFRAP16234 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFRAP16234 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PDGFRAP16234 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.3■□□□□ 0.84
PDGFRAP16234 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFRAP16234 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFRAP16234 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PDGFRAP16234 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFRAP16234 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.3■□□□□ 0.84
PDGFRAP16234 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDGFRAP16234 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
PDGFRAP16234 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PDGFRAP16234 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFRAP16234 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.29■□□□□ 0.84
PDGFRAP16234 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFRAP16234 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFRAP16234 AC104417.2-201ENST00000562989 1793 ntBASIC20.29■□□□□ 0.84
PDGFRAP16234 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PDGFRAP16234 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFRAP16234 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFRAP16234 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.29■□□□□ 0.84
PDGFRAP16234 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.29■□□□□ 0.84
PDGFRAP16234 C1QL1P1-201ENST00000568105 661 ntBASIC20.29■□□□□ 0.84
PDGFRAP16234 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.29■□□□□ 0.84
PDGFRAP16234 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PDGFRAP16234 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFRAP16234 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFRAP16234 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDGFRAP16234 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.29■□□□□ 0.84
PDGFRAP16234 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFRAP16234 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFRAP16234 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFRAP16234 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFRAP16234 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.28■□□□□ 0.84
PDGFRAP16234 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDGFRAP16234 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFRAP16234 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFRAP16234 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.28■□□□□ 0.84
PDGFRAP16234 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.28■□□□□ 0.84
PDGFRAP16234 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.28■□□□□ 0.84
PDGFRAP16234 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFRAP16234 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFRAP16234 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.28■□□□□ 0.84
PDGFRAP16234 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.28■□□□□ 0.84
PDGFRAP16234 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFRAP16234 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PDGFRAP16234 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDGFRAP16234 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
PDGFRAP16234 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDGFRAP16234 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PDGFRAP16234 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PDGFRAP16234 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
PDGFRAP16234 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.27■□□□□ 0.84
PDGFRAP16234 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.27■□□□□ 0.84
PDGFRAP16234 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms