Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL4P13236 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.28■□□□□ 0.52
CCL4P13236 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL4P13236 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL4P13236 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL4P13236 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL4P13236 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL4P13236 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL4P13236 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL4P13236 HOMER2P1-201ENST00000455653 964 ntBASIC18.28■□□□□ 0.52
CCL4P13236 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL4P13236 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL4P13236 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL4P13236 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.28■□□□□ 0.52
CCL4P13236 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.28■□□□□ 0.52
CCL4P13236 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL4P13236 AP000550.4-202ENST00000639755 178 ntBASIC18.28■□□□□ 0.52
CCL4P13236 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.28■□□□□ 0.52
CCL4P13236 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL4P13236 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL4P13236 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL4P13236 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL4P13236 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL4P13236 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL4P13236 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL4P13236 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL4P13236 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.27■□□□□ 0.52
CCL4P13236 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCL4P13236 PCED1CP-201ENST00000419887 785 ntBASIC18.27■□□□□ 0.52
CCL4P13236 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.27■□□□□ 0.52
CCL4P13236 FAM86EP-206ENST00000510506 987 ntBASIC18.27■□□□□ 0.52
CCL4P13236 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.27■□□□□ 0.52
CCL4P13236 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.27■□□□□ 0.52
CCL4P13236 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.27■□□□□ 0.52
CCL4P13236 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.27■□□□□ 0.52
CCL4P13236 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CCL4P13236 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.27■□□□□ 0.52
CCL4P13236 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCL4P13236 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.27■□□□□ 0.52
CCL4P13236 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL4P13236 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
CCL4P13236 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL4P13236 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL4P13236 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.26■□□□□ 0.51
CCL4P13236 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCL4P13236 AC092667.1-201ENST00000434301 2586 ntBASIC18.26■□□□□ 0.51
CCL4P13236 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCL4P13236 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CCL4P13236 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.26■□□□□ 0.51
CCL4P13236 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL4P13236 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.26■□□□□ 0.51
CCL4P13236 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL4P13236 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.26■□□□□ 0.51
CCL4P13236 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.26■□□□□ 0.51
CCL4P13236 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.26■□□□□ 0.51
CCL4P13236 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL4P13236 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCL4P13236 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL4P13236 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL4P13236 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL4P13236 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL4P13236 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL4P13236 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL4P13236 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCL4P13236 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL4P13236 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCL4P13236 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCL4P13236 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCL4P13236 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.25■□□□□ 0.51
CCL4P13236 KRT18P38-201ENST00000449496 1282 ntBASIC18.25■□□□□ 0.51
CCL4P13236 AL671277.2-201ENST00000458060 996 ntBASIC18.25■□□□□ 0.51
CCL4P13236 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CCL4P13236 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.25■□□□□ 0.51
CCL4P13236 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.25■□□□□ 0.51
CCL4P13236 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.25■□□□□ 0.51
CCL4P13236 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL4P13236 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CCL4P13236 AL121956.5-201ENST00000625261 221 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms