Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CDH1P12830 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH1P12830 RN7SL471P-201ENST00000580476 299 ntBASIC18.85■□□□□ 0.61
CDH1P12830 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.85■□□□□ 0.61
CDH1P12830 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH1P12830 ITM2C-210ENST00000620962 501 ntBASIC18.85■□□□□ 0.61
CDH1P12830 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH1P12830 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH1P12830 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH1P12830 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH1P12830 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.85■□□□□ 0.61
CDH1P12830 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CDH1P12830 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH1P12830 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH1P12830 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH1P12830 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDH1P12830 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CDH1P12830 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDH1P12830 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH1P12830 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH1P12830 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CDH1P12830 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDH1P12830 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CDH1P12830 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 KRT18P29-201ENST00000397031 1267 ntBASIC18.84■□□□□ 0.61
CDH1P12830 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH1P12830 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.84■□□□□ 0.61
CDH1P12830 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CDH1P12830 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH1P12830 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDH1P12830 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH1P12830 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH1P12830 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH1P12830 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH1P12830 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH1P12830 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CDH1P12830 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.83■□□□□ 0.61
CDH1P12830 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH1P12830 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.83■□□□□ 0.61
CDH1P12830 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH1P12830 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
CDH1P12830 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH1P12830 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH1P12830 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.83■□□□□ 0.61
CDH1P12830 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CDH1P12830 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH1P12830 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH1P12830 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CDH1P12830 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH1P12830 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.83■□□□□ 0.6
CDH1P12830 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH1P12830 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH1P12830 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH1P12830 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH1P12830 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH1P12830 AIRN-201ENST00000601203 4374 ntBASIC18.83■□□□□ 0.6
CDH1P12830 Z82202.1-201ENST00000623446 1880 ntBASIC18.83■□□□□ 0.6
CDH1P12830 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH1P12830 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDH1P12830 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CDH1P12830 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH1P12830 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CDH1P12830 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH1P12830 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH1P12830 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH1P12830 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDH1P12830 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH1P12830 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH1P12830 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH1P12830 ABHD17AP1-201ENST00000358206 933 ntBASIC18.82■□□□□ 0.6
CDH1P12830 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH1P12830 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH1P12830 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH1P12830 KRT18P16-201ENST00000510337 1294 ntBASIC18.82■□□□□ 0.6
CDH1P12830 C1QBPP2-201ENST00000528754 825 ntBASIC18.82■□□□□ 0.6
CDH1P12830 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH1P12830 AC124016.1-201ENST00000609552 612 ntBASIC18.82■□□□□ 0.6
CDH1P12830 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDH1P12830 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH1P12830 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH1P12830 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH1P12830 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH1P12830 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH1P12830 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH1P12830 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms