Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.3■□□□□ 0.84
RARAP10276 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.3■□□□□ 0.84
RARAP10276 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RARAP10276 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARAP10276 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RARAP10276 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.3■□□□□ 0.84
RARAP10276 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RARAP10276 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.3■□□□□ 0.84
RARAP10276 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARAP10276 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.29■□□□□ 0.84
RARAP10276 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
RARAP10276 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RARAP10276 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.29■□□□□ 0.84
RARAP10276 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.29■□□□□ 0.84
RARAP10276 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.29■□□□□ 0.84
RARAP10276 YBX1P10-201ENST00000444752 975 ntBASIC20.29■□□□□ 0.84
RARAP10276 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.29■□□□□ 0.84
RARAP10276 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.29■□□□□ 0.84
RARAP10276 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
RARAP10276 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.29■□□□□ 0.84
RARAP10276 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.29■□□□□ 0.84
RARAP10276 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARAP10276 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
RARAP10276 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.28■□□□□ 0.84
RARAP10276 KRT18P6-201ENST00000555540 1265 ntBASIC20.28■□□□□ 0.84
RARAP10276 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.28■□□□□ 0.84
RARAP10276 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.28■□□□□ 0.84
RARAP10276 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.28■□□□□ 0.84
RARAP10276 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.28■□□□□ 0.84
RARAP10276 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RARAP10276 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RARAP10276 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RARAP10276 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RARAP10276 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARAP10276 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
RARAP10276 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARAP10276 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARAP10276 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARAP10276 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RARAP10276 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.27■□□□□ 0.84
RARAP10276 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RARAP10276 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RARAP10276 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARAP10276 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.27■□□□□ 0.84
RARAP10276 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RARAP10276 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
RARAP10276 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.27■□□□□ 0.84
RARAP10276 AP003097.1-201ENST00000530657 1135 ntBASIC20.27■□□□□ 0.84
RARAP10276 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.27■□□□□ 0.84
RARAP10276 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARAP10276 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RARAP10276 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARAP10276 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARAP10276 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
RARAP10276 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.27■□□□□ 0.83
RARAP10276 AL161938.1-201ENST00000569833 2180 ntBASIC20.27■□□□□ 0.83
RARAP10276 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RARAP10276 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARAP10276 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.26■□□□□ 0.83
RARAP10276 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARAP10276 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.26■□□□□ 0.83
RARAP10276 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARAP10276 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARAP10276 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
RARAP10276 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARAP10276 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RARAP10276 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms