Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNYL3P0C7X3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCNYL3P0C7X3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCNYL3P0C7X3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCNYL3P0C7X3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 MIR1238-201ENST00000408483 83 ntBASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 AL031985.4-201ENST00000642138 673 ntBASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CCNYL3P0C7X3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 TCF3P1-201ENST00000423021 1937 ntBASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 AC116562.2-201ENST00000507042 360 ntBASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 AP000525.1-201ENST00000608286 694 ntBASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CCNYL3P0C7X3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 AL020996.1-203ENST00000536896 2307 ntBASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 RCN1P1-201ENST00000400413 996 ntBASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 AC079598.2-202ENST00000546624 1451 ntBASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 AC116351.2-201ENST00000606540 1585 ntBASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNYL3P0C7X3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CCNYL3P0C7X3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.61■□□□□ 0.57
CCNYL3P0C7X3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCNYL3P0C7X3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.61■□□□□ 0.57
CCNYL3P0C7X3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCNYL3P0C7X3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms