Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSBP07858 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSBP07858 ZNF815P-204ENST00000434898 1737 ntBASIC18.37■□□□□ 0.53
CTSBP07858 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CTSBP07858 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTSBP07858 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.37■□□□□ 0.53
CTSBP07858 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.37■□□□□ 0.53
CTSBP07858 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSBP07858 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.37■□□□□ 0.53
CTSBP07858 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CTSBP07858 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CTSBP07858 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.36■□□□□ 0.53
CTSBP07858 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.36■□□□□ 0.53
CTSBP07858 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.36■□□□□ 0.53
CTSBP07858 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CTSBP07858 FAM207BP-201ENST00000447172 505 ntBASIC18.36■□□□□ 0.53
CTSBP07858 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.36■□□□□ 0.53
CTSBP07858 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.36■□□□□ 0.53
CTSBP07858 KRT18P21-201ENST00000515767 1272 ntBASIC18.36■□□□□ 0.53
CTSBP07858 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.36■□□□□ 0.53
CTSBP07858 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.36■□□□□ 0.53
CTSBP07858 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTSBP07858 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CTSBP07858 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.36■□□□□ 0.53
CTSBP07858 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.36■□□□□ 0.53
CTSBP07858 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CTSBP07858 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CTSBP07858 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSBP07858 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CTSBP07858 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSBP07858 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.35■□□□□ 0.53
CTSBP07858 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSBP07858 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSBP07858 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSBP07858 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSBP07858 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSBP07858 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSBP07858 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSBP07858 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSBP07858 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSBP07858 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.35■□□□□ 0.53
CTSBP07858 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSBP07858 DGCR10-201ENST00000609839 495 ntBASIC18.35■□□□□ 0.53
CTSBP07858 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.35■□□□□ 0.53
CTSBP07858 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSBP07858 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSBP07858 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.34■□□□□ 0.53
CTSBP07858 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSBP07858 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSBP07858 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTSBP07858 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSBP07858 LINC01568-207ENST00000641790 1380 ntBASIC18.34■□□□□ 0.53
CTSBP07858 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
CTSBP07858 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.34■□□□□ 0.53
CTSBP07858 RCN1P1-201ENST00000400413 996 ntBASIC18.34■□□□□ 0.53
CTSBP07858 MFAP1P1-201ENST00000442257 1255 ntBASIC18.34■□□□□ 0.53
CTSBP07858 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.34■□□□□ 0.53
CTSBP07858 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.34■□□□□ 0.53
CTSBP07858 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.34■□□□□ 0.53
CTSBP07858 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTSBP07858 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.34■□□□□ 0.53
CTSBP07858 NAPSB-206ENST00000562112 1266 ntBASIC18.34■□□□□ 0.53
CTSBP07858 AP005242.2-201ENST00000580065 1175 ntBASIC18.34■□□□□ 0.53
CTSBP07858 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.34■□□□□ 0.53
CTSBP07858 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.34■□□□□ 0.53
CTSBP07858 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CTSBP07858 AC145285.6-201ENST00000604632 637 ntBASIC18.34■□□□□ 0.53
CTSBP07858 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.34■□□□□ 0.53
CTSBP07858 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.34■□□□□ 0.53
CTSBP07858 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSBP07858 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSBP07858 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CTSBP07858 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.34■□□□□ 0.53
CTSBP07858 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTSBP07858 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTSBP07858 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.33■□□□□ 0.53
CTSBP07858 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.33■□□□□ 0.53
CTSBP07858 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTSBP07858 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTSBP07858 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.33■□□□□ 0.53
CTSBP07858 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CTSBP07858 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTSBP07858 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CTSBP07858 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTSBP07858 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CTSBP07858 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms