Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 MCRIP2P1-201ENST00000394346 511 ntBASIC17.38■□□□□ 0.37
HLA-DPB1P04440 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.38■□□□□ 0.37
HLA-DPB1P04440 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 AC087633.2-202ENST00000565166 1439 ntBASIC17.38■□□□□ 0.37
HLA-DPB1P04440 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 AC083906.2-201ENST00000511578 360 ntBASIC17.37■□□□□ 0.37
HLA-DPB1P04440 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPB1P04440 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 AL512625.2-201ENST00000417533 625 ntBASIC17.36■□□□□ 0.37
HLA-DPB1P04440 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.36■□□□□ 0.37
HLA-DPB1P04440 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 AC100791.3-201ENST00000617619 330 ntBASIC17.36■□□□□ 0.37
HLA-DPB1P04440 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPB1P04440 MKRN4P-201ENST00000444706 1521 ntBASIC17.36■□□□□ 0.37
HLA-DPB1P04440 PTBP1P-201ENST00000554374 1601 ntBASIC17.36■□□□□ 0.37
HLA-DPB1P04440 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 KRT18P68-201ENST00000392293 1000 ntBASIC17.35■□□□□ 0.37
HLA-DPB1P04440 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms