Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.66■■□□□ 1.22
COL2A1P02458 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL2A1P02458 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
COL2A1P02458 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL2A1P02458 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.66■■□□□ 1.22
COL2A1P02458 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL2A1P02458 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL2A1P02458 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC22.66■■□□□ 1.22
COL2A1P02458 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
COL2A1P02458 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.66■■□□□ 1.22
COL2A1P02458 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL2A1P02458 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.66■■□□□ 1.22
COL2A1P02458 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL2A1P02458 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.65■■□□□ 1.22
COL2A1P02458 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL2A1P02458 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL2A1P02458 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
COL2A1P02458 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
COL2A1P02458 AL391422.3-201ENST00000603791 2761 ntBASIC22.65■■□□□ 1.22
COL2A1P02458 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.65■■□□□ 1.22
COL2A1P02458 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL2A1P02458 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL2A1P02458 AC009947.2-201ENST00000444014 672 ntBASIC22.65■■□□□ 1.22
COL2A1P02458 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC22.65■■□□□ 1.22
COL2A1P02458 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.65■■□□□ 1.22
COL2A1P02458 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.65■■□□□ 1.22
COL2A1P02458 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL2A1P02458 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.65■■□□□ 1.22
COL2A1P02458 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL2A1P02458 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.64■■□□□ 1.22
COL2A1P02458 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL2A1P02458 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.64■■□□□ 1.22
COL2A1P02458 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL2A1P02458 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.64■■□□□ 1.22
COL2A1P02458 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.64■■□□□ 1.21
COL2A1P02458 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL2A1P02458 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL2A1P02458 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.64■■□□□ 1.21
COL2A1P02458 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL2A1P02458 AL359075.1-203ENST00000462729 1002 ntBASIC22.64■■□□□ 1.21
COL2A1P02458 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL2A1P02458 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.64■■□□□ 1.21
COL2A1P02458 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.64■■□□□ 1.21
COL2A1P02458 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.64■■□□□ 1.21
COL2A1P02458 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
COL2A1P02458 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
COL2A1P02458 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.21
COL2A1P02458 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL2A1P02458 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL2A1P02458 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.64■■□□□ 1.21
COL2A1P02458 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
COL2A1P02458 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL2A1P02458 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL2A1P02458 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL2A1P02458 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL2A1P02458 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL2A1P02458 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
COL2A1P02458 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL2A1P02458 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL2A1P02458 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.63■■□□□ 1.21
COL2A1P02458 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL2A1P02458 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL2A1P02458 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL2A1P02458 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.63■■□□□ 1.21
COL2A1P02458 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.63■■□□□ 1.21
COL2A1P02458 AP000550.4-202ENST00000639755 178 ntBASIC22.63■■□□□ 1.21
COL2A1P02458 AC092667.1-201ENST00000434301 2586 ntBASIC22.63■■□□□ 1.21
COL2A1P02458 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
COL2A1P02458 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL2A1P02458 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.63■■□□□ 1.21
COL2A1P02458 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL2A1P02458 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL2A1P02458 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.62■■□□□ 1.21
COL2A1P02458 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL2A1P02458 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.62■■□□□ 1.21
COL2A1P02458 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL2A1P02458 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.62■■□□□ 1.21
COL2A1P02458 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL2A1P02458 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL2A1P02458 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.62■■□□□ 1.21
COL2A1P02458 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL2A1P02458 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.61■■□□□ 1.21
COL2A1P02458 KRT18P38-201ENST00000449496 1282 ntBASIC22.61■■□□□ 1.21
COL2A1P02458 AL671277.2-201ENST00000458060 996 ntBASIC22.61■■□□□ 1.21
COL2A1P02458 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.61■■□□□ 1.21
COL2A1P02458 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.61■■□□□ 1.21
COL2A1P02458 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.61■■□□□ 1.21
COL2A1P02458 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.61■■□□□ 1.21
COL2A1P02458 AC083849.1-201ENST00000615227 514 ntBASIC22.61■■□□□ 1.21
COL2A1P02458 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL2A1P02458 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.61■■□□□ 1.21
COL2A1P02458 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL2A1P02458 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL2A1P02458 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
COL2A1P02458 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL2A1P02458 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL2A1P02458 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL2A1P02458 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL2A1P02458 COPS8-203ENST00000409334 794 ntTSL 5 BASIC22.6■■□□□ 1.21
COL2A1P02458 FAM86EP-206ENST00000510506 987 ntBASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms