Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CEACAM4O75871 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CEACAM4O75871 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CEACAM4O75871 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CEACAM4O75871 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.6■□□□□ 0.41
CEACAM4O75871 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CEACAM4O75871 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.6■□□□□ 0.41
CEACAM4O75871 GCSHP2-201ENST00000560971 527 ntBASIC17.6■□□□□ 0.41
CEACAM4O75871 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.6■□□□□ 0.41
CEACAM4O75871 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CEACAM4O75871 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CEACAM4O75871 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CEACAM4O75871 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
CEACAM4O75871 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.6■□□□□ 0.41
CEACAM4O75871 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.6■□□□□ 0.41
CEACAM4O75871 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CEACAM4O75871 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.6■□□□□ 0.41
CEACAM4O75871 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CEACAM4O75871 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CEACAM4O75871 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CEACAM4O75871 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CEACAM4O75871 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CEACAM4O75871 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.59■□□□□ 0.41
CEACAM4O75871 AL691432.2-201ENST00000607222 2038 ntBASIC17.59■□□□□ 0.41
CEACAM4O75871 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.59■□□□□ 0.41
CEACAM4O75871 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CEACAM4O75871 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.59■□□□□ 0.41
CEACAM4O75871 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 HCG4P8-203ENST00000443049 980 ntBASIC17.59■□□□□ 0.41
CEACAM4O75871 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.59■□□□□ 0.41
CEACAM4O75871 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.59■□□□□ 0.41
CEACAM4O75871 AL121894.2-201ENST00000602977 491 ntBASIC17.59■□□□□ 0.41
CEACAM4O75871 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.59■□□□□ 0.41
CEACAM4O75871 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.59■□□□□ 0.41
CEACAM4O75871 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CEACAM4O75871 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.58■□□□□ 0.41
CEACAM4O75871 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CEACAM4O75871 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CEACAM4O75871 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.58■□□□□ 0.41
CEACAM4O75871 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CEACAM4O75871 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CEACAM4O75871 AL450487.1-201ENST00000426799 995 ntBASIC17.58■□□□□ 0.4
CEACAM4O75871 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.58■□□□□ 0.4
CEACAM4O75871 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.58■□□□□ 0.4
CEACAM4O75871 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.58■□□□□ 0.4
CEACAM4O75871 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CEACAM4O75871 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CEACAM4O75871 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CEACAM4O75871 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.58■□□□□ 0.4
CEACAM4O75871 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CEACAM4O75871 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CEACAM4O75871 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.57■□□□□ 0.4
CEACAM4O75871 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.57■□□□□ 0.4
CEACAM4O75871 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.57■□□□□ 0.4
CEACAM4O75871 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.57■□□□□ 0.4
CEACAM4O75871 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.57■□□□□ 0.4
CEACAM4O75871 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.57■□□□□ 0.4
CEACAM4O75871 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.57■□□□□ 0.4
CEACAM4O75871 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.57■□□□□ 0.4
CEACAM4O75871 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CEACAM4O75871 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.57■□□□□ 0.4
CEACAM4O75871 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.57■□□□□ 0.4
CEACAM4O75871 MIR4674-201ENST00000582457 87 ntBASIC17.57■□□□□ 0.4
CEACAM4O75871 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.57■□□□□ 0.4
CEACAM4O75871 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
CEACAM4O75871 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.57■□□□□ 0.4
CEACAM4O75871 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CEACAM4O75871 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
CEACAM4O75871 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM4O75871 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.57■□□□□ 0.4
CEACAM4O75871 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms