Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CPNE3O75131 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CPNE3O75131 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE3O75131 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE3O75131 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE3O75131 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE3O75131 MIR1224-201ENST00000408193 85 ntBASIC18.55■□□□□ 0.56
CPNE3O75131 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE3O75131 NAPSB-206ENST00000562112 1266 ntBASIC18.55■□□□□ 0.56
CPNE3O75131 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.55■□□□□ 0.56
CPNE3O75131 MIR6786-201ENST00000616843 113 ntBASIC18.55■□□□□ 0.56
CPNE3O75131 AC131212.4-201ENST00000623606 975 ntBASIC18.55■□□□□ 0.56
CPNE3O75131 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE3O75131 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE3O75131 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CPNE3O75131 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE3O75131 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CPNE3O75131 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE3O75131 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CPNE3O75131 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE3O75131 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE3O75131 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CPNE3O75131 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE3O75131 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CPNE3O75131 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE3O75131 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE3O75131 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE3O75131 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE3O75131 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
CPNE3O75131 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE3O75131 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE3O75131 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CPNE3O75131 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE3O75131 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE3O75131 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
CPNE3O75131 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.54■□□□□ 0.56
CPNE3O75131 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.54■□□□□ 0.56
CPNE3O75131 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.54■□□□□ 0.56
CPNE3O75131 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE3O75131 AC020907.5-201ENST00000624372 1936 ntBASIC18.54■□□□□ 0.56
CPNE3O75131 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.54■□□□□ 0.56
CPNE3O75131 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE3O75131 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE3O75131 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE3O75131 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE3O75131 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CPNE3O75131 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE3O75131 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CPNE3O75131 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE3O75131 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CPNE3O75131 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE3O75131 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE3O75131 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE3O75131 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE3O75131 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE3O75131 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CPNE3O75131 AL390955.1-201ENST00000428694 934 ntBASIC18.53■□□□□ 0.56
CPNE3O75131 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE3O75131 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE3O75131 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE3O75131 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CPNE3O75131 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE3O75131 DGCR10-201ENST00000609839 495 ntBASIC18.53■□□□□ 0.56
CPNE3O75131 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE3O75131 AP001271.2-201ENST00000624018 1556 ntBASIC18.53■□□□□ 0.56
CPNE3O75131 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.53■□□□□ 0.56
CPNE3O75131 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE3O75131 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE3O75131 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE3O75131 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE3O75131 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE3O75131 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
CPNE3O75131 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE3O75131 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE3O75131 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CPNE3O75131 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE3O75131 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CPNE3O75131 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE3O75131 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE3O75131 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CPNE3O75131 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE3O75131 KRT8P9-201ENST00000558927 1449 ntBASIC18.52■□□□□ 0.56
CPNE3O75131 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE3O75131 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.52■□□□□ 0.56
CPNE3O75131 RCN1P1-201ENST00000400413 996 ntBASIC18.52■□□□□ 0.56
CPNE3O75131 AC004980.1-204ENST00000429707 299 ntBASIC18.52■□□□□ 0.56
CPNE3O75131 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE3O75131 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE3O75131 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE3O75131 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.52■□□□□ 0.56
CPNE3O75131 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CPNE3O75131 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE3O75131 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CPNE3O75131 TMEM179-206ENST00000616017 1645 ntBASIC18.52■□□□□ 0.55
CPNE3O75131 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE3O75131 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
CPNE3O75131 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE3O75131 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
CPNE3O75131 GABARAPL3-202ENST00000624044 1851 ntBASIC18.52■□□□□ 0.55
CPNE3O75131 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms