Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF11O60813 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PRAMEF11O60813 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF11O60813 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF11O60813 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF11O60813 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF11O60813 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF11O60813 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF11O60813 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF11O60813 TSPY7P-201ENST00000431358 1114 ntBASIC19.66■□□□□ 0.74
PRAMEF11O60813 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF11O60813 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 SNORA78-201ENST00000459373 127 ntBASIC19.66■□□□□ 0.74
PRAMEF11O60813 NUDT16P1-203ENST00000513809 620 ntBASIC19.66■□□□□ 0.74
PRAMEF11O60813 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF11O60813 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF11O60813 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF11O60813 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAMEF11O60813 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF11O60813 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.65■□□□□ 0.74
PRAMEF11O60813 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.65■□□□□ 0.74
PRAMEF11O60813 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.65■□□□□ 0.74
PRAMEF11O60813 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PRAMEF11O60813 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF11O60813 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.65■□□□□ 0.74
PRAMEF11O60813 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.65■□□□□ 0.74
PRAMEF11O60813 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.65■□□□□ 0.74
PRAMEF11O60813 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.65■□□□□ 0.74
PRAMEF11O60813 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.65■□□□□ 0.74
PRAMEF11O60813 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.65■□□□□ 0.74
PRAMEF11O60813 AC026471.5-201ENST00000615068 467 ntBASIC19.65■□□□□ 0.74
PRAMEF11O60813 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF11O60813 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.65■□□□□ 0.74
PRAMEF11O60813 KRT8P41-201ENST00000533985 1514 ntBASIC19.65■□□□□ 0.74
PRAMEF11O60813 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.64■□□□□ 0.74
PRAMEF11O60813 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
PRAMEF11O60813 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PRAMEF11O60813 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF11O60813 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF11O60813 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF11O60813 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PRAMEF11O60813 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PRAMEF11O60813 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.64■□□□□ 0.73
PRAMEF11O60813 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.64■□□□□ 0.73
PRAMEF11O60813 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF11O60813 MIR4497-201ENST00000583208 89 ntBASIC19.64■□□□□ 0.73
PRAMEF11O60813 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.64■□□□□ 0.73
PRAMEF11O60813 RCC2P6-201ENST00000526625 1557 ntBASIC19.64■□□□□ 0.73
PRAMEF11O60813 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEF11O60813 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
PRAMEF11O60813 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF11O60813 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEF11O60813 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF11O60813 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF11O60813 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF11O60813 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF11O60813 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF11O60813 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PRAMEF11O60813 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.63■□□□□ 0.73
PRAMEF11O60813 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.63■□□□□ 0.73
PRAMEF11O60813 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.63■□□□□ 0.73
PRAMEF11O60813 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.63■□□□□ 0.73
PRAMEF11O60813 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.63■□□□□ 0.73
PRAMEF11O60813 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF11O60813 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PRAMEF11O60813 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PRAMEF11O60813 MESTP1-201ENST00000404287 994 ntBASIC19.63■□□□□ 0.73
PRAMEF11O60813 AL596275.1-201ENST00000423464 877 ntBASIC19.63■□□□□ 0.73
PRAMEF11O60813 AL355355.2-201ENST00000442321 338 ntBASIC19.63■□□□□ 0.73
PRAMEF11O60813 AC011506.1-201ENST00000474329 610 ntBASIC19.63■□□□□ 0.73
PRAMEF11O60813 AC116562.2-201ENST00000507042 360 ntBASIC19.63■□□□□ 0.73
PRAMEF11O60813 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.63■□□□□ 0.73
PRAMEF11O60813 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.63■□□□□ 0.73
PRAMEF11O60813 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PRAMEF11O60813 MIR6786-201ENST00000616843 113 ntBASIC19.63■□□□□ 0.73
PRAMEF11O60813 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF11O60813 AC007952.6-201ENST00000573168 2673 ntBASIC19.63■□□□□ 0.73
PRAMEF11O60813 AC003957.1-201ENST00000625108 2673 ntBASIC19.63■□□□□ 0.73
PRAMEF11O60813 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.63■□□□□ 0.73
PRAMEF11O60813 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PRAMEF11O60813 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PRAMEF11O60813 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms