Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF4O60810 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 AC239809.2-201ENST00000415381 517 ntBASIC18.63■□□□□ 0.57
PRAMEF4O60810 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 TSPY20P-201ENST00000450910 630 ntBASIC18.63■□□□□ 0.57
PRAMEF4O60810 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 AL161938.1-201ENST00000569833 2180 ntBASIC18.63■□□□□ 0.57
PRAMEF4O60810 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF4O60810 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRAMEF4O60810 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF4O60810 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF4O60810 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF4O60810 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF4O60810 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF4O60810 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF4O60810 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF4O60810 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF4O60810 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF4O60810 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
PRAMEF4O60810 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF4O60810 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF4O60810 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF4O60810 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF4O60810 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.61■□□□□ 0.57
PRAMEF4O60810 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF4O60810 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.61■□□□□ 0.57
PRAMEF4O60810 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF4O60810 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF4O60810 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF4O60810 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PRAMEF4O60810 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PRAMEF4O60810 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.61■□□□□ 0.57
PRAMEF4O60810 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF4O60810 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.61■□□□□ 0.57
PRAMEF4O60810 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF4O60810 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF4O60810 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF4O60810 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF4O60810 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF4O60810 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF4O60810 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF4O60810 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF4O60810 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF4O60810 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF4O60810 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF4O60810 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
PRAMEF4O60810 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms