Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTNND1O60716 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTNND1O60716 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTNND1O60716 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTNND1O60716 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CTNND1O60716 COPS8-203ENST00000409334 794 ntTSL 5 BASIC22.62■■□□□ 1.21
CTNND1O60716 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTNND1O60716 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.62■■□□□ 1.21
CTNND1O60716 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.62■■□□□ 1.21
CTNND1O60716 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.62■■□□□ 1.21
CTNND1O60716 PRSS44-201ENST00000515154 1146 ntBASIC22.62■■□□□ 1.21
CTNND1O60716 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.62■■□□□ 1.21
CTNND1O60716 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.62■■□□□ 1.21
CTNND1O60716 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.62■■□□□ 1.21
CTNND1O60716 AC008622.2-201ENST00000617006 1229 ntBASIC22.62■■□□□ 1.21
CTNND1O60716 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
CTNND1O60716 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.62■■□□□ 1.21
CTNND1O60716 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTNND1O60716 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.62■■□□□ 1.21
CTNND1O60716 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTNND1O60716 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTNND1O60716 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTNND1O60716 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CTNND1O60716 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.61■■□□□ 1.21
CTNND1O60716 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CTNND1O60716 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CTNND1O60716 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CTNND1O60716 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
CTNND1O60716 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.61■■□□□ 1.21
CTNND1O60716 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.61■■□□□ 1.21
CTNND1O60716 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.61■■□□□ 1.21
CTNND1O60716 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CTNND1O60716 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.61■■□□□ 1.21
CTNND1O60716 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CTNND1O60716 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CTNND1O60716 KRT8P11-201ENST00000409686 1436 ntBASIC22.61■■□□□ 1.21
CTNND1O60716 KRT8P45-201ENST00000414328 1447 ntBASIC22.61■■□□□ 1.21
CTNND1O60716 PCED1CP-201ENST00000419887 785 ntBASIC22.61■■□□□ 1.21
CTNND1O60716 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.61■■□□□ 1.21
CTNND1O60716 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.61■■□□□ 1.21
CTNND1O60716 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CTNND1O60716 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CTNND1O60716 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CTNND1O60716 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CTNND1O60716 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
CTNND1O60716 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CTNND1O60716 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.61■■□□□ 1.21
CTNND1O60716 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CTNND1O60716 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CTNND1O60716 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.61■■□□□ 1.21
CTNND1O60716 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CTNND1O60716 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CTNND1O60716 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CTNND1O60716 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CTNND1O60716 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CTNND1O60716 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.6■■□□□ 1.21
CTNND1O60716 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTNND1O60716 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CTNND1O60716 AL512408.1-201ENST00000569378 2000 ntBASIC22.6■■□□□ 1.21
CTNND1O60716 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTNND1O60716 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.6■■□□□ 1.21
CTNND1O60716 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.6■■□□□ 1.21
CTNND1O60716 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTNND1O60716 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTNND1O60716 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTNND1O60716 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC22.6■■□□□ 1.21
CTNND1O60716 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.6■■□□□ 1.21
CTNND1O60716 AC009947.2-201ENST00000444014 672 ntBASIC22.6■■□□□ 1.21
CTNND1O60716 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC22.6■■□□□ 1.21
CTNND1O60716 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.6■■□□□ 1.21
CTNND1O60716 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CTNND1O60716 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.6■■□□□ 1.21
CTNND1O60716 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC22.6■■□□□ 1.21
CTNND1O60716 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTNND1O60716 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.6■■□□□ 1.21
CTNND1O60716 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
CTNND1O60716 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTNND1O60716 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.6■■□□□ 1.21
CTNND1O60716 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.6■■□□□ 1.21
CTNND1O60716 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CTNND1O60716 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
CTNND1O60716 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTNND1O60716 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTNND1O60716 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTNND1O60716 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
CTNND1O60716 AL359075.1-203ENST00000462729 1002 ntBASIC22.59■■□□□ 1.21
CTNND1O60716 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.59■■□□□ 1.21
CTNND1O60716 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.59■■□□□ 1.21
CTNND1O60716 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.59■■□□□ 1.21
CTNND1O60716 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.59■■□□□ 1.21
CTNND1O60716 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTNND1O60716 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.59■■□□□ 1.21
CTNND1O60716 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CTNND1O60716 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CTNND1O60716 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTNND1O60716 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTNND1O60716 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CTNND1O60716 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTNND1O60716 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTNND1O60716 AL162377.1-201ENST00000618844 1793 ntBASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms