Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.96■□□□□ 0.79
TSPAN3O60637 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.96■□□□□ 0.79
TSPAN3O60637 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN3O60637 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.96■□□□□ 0.79
TSPAN3O60637 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN3O60637 AC130371.2-201ENST00000619443 611 ntBASIC19.96■□□□□ 0.79
TSPAN3O60637 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.96■□□□□ 0.79
TSPAN3O60637 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN3O60637 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN3O60637 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TSPAN3O60637 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.96■□□□□ 0.79
TSPAN3O60637 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN3O60637 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.96■□□□□ 0.79
TSPAN3O60637 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN3O60637 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
TSPAN3O60637 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
TSPAN3O60637 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.96■□□□□ 0.79
TSPAN3O60637 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.96■□□□□ 0.79
TSPAN3O60637 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.95■□□□□ 0.78
TSPAN3O60637 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
TSPAN3O60637 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN3O60637 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN3O60637 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN3O60637 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.95■□□□□ 0.78
TSPAN3O60637 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN3O60637 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.95■□□□□ 0.78
TSPAN3O60637 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN3O60637 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.95■□□□□ 0.78
TSPAN3O60637 CYP2D8P-201ENST00000433633 1490 ntBASIC19.95■□□□□ 0.78
TSPAN3O60637 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN3O60637 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN3O60637 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN3O60637 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TSPAN3O60637 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.95■□□□□ 0.78
TSPAN3O60637 CRYGFP-201ENST00000418459 633 ntBASIC19.95■□□□□ 0.78
TSPAN3O60637 AC004951.3-201ENST00000418645 1148 ntBASIC19.95■□□□□ 0.78
TSPAN3O60637 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.95■□□□□ 0.78
TSPAN3O60637 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.95■□□□□ 0.78
TSPAN3O60637 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.95■□□□□ 0.78
TSPAN3O60637 Z85996.1-201ENST00000494644 937 ntBASIC19.95■□□□□ 0.78
TSPAN3O60637 AC097488.1-201ENST00000507834 756 ntBASIC19.95■□□□□ 0.78
TSPAN3O60637 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TSPAN3O60637 SLC25A1P4-201ENST00000567977 778 ntBASIC19.95■□□□□ 0.78
TSPAN3O60637 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TSPAN3O60637 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TSPAN3O60637 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
TSPAN3O60637 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN3O60637 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN3O60637 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN3O60637 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN3O60637 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.94■□□□□ 0.78
TSPAN3O60637 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TSPAN3O60637 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TSPAN3O60637 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.94■□□□□ 0.78
TSPAN3O60637 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.94■□□□□ 0.78
TSPAN3O60637 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.94■□□□□ 0.78
TSPAN3O60637 FITM1-202ENST00000559294 800 ntBASIC19.94■□□□□ 0.78
TSPAN3O60637 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.94■□□□□ 0.78
TSPAN3O60637 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN3O60637 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TSPAN3O60637 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.94■□□□□ 0.78
TSPAN3O60637 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.93■□□□□ 0.78
TSPAN3O60637 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN3O60637 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN3O60637 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.93■□□□□ 0.78
TSPAN3O60637 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.93■□□□□ 0.78
TSPAN3O60637 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.93■□□□□ 0.78
TSPAN3O60637 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.93■□□□□ 0.78
TSPAN3O60637 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN3O60637 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN3O60637 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN3O60637 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TSPAN3O60637 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TSPAN3O60637 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN3O60637 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.93■□□□□ 0.78
TSPAN3O60637 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN3O60637 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN3O60637 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN3O60637 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
TSPAN3O60637 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN3O60637 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN3O60637 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.93■□□□□ 0.78
TSPAN3O60637 AC091390.4-202ENST00000476426 537 ntBASIC19.93■□□□□ 0.78
TSPAN3O60637 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.93■□□□□ 0.78
TSPAN3O60637 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.93■□□□□ 0.78
TSPAN3O60637 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
TSPAN3O60637 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.93■□□□□ 0.78
TSPAN3O60637 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms