Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHGA12O60330 HMGA1P5-201ENST00000412453 271 ntBASIC19.18■□□□□ 0.66
PCDHGA12O60330 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA12O60330 AC063952.2-201ENST00000498792 1227 ntBASIC19.18■□□□□ 0.66
PCDHGA12O60330 AC022616.7-201ENST00000525383 220 ntBASIC19.18■□□□□ 0.66
PCDHGA12O60330 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PCDHGA12O60330 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGA12O60330 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PCDHGA12O60330 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA12O60330 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA12O60330 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA12O60330 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA12O60330 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGA12O60330 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA12O60330 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA12O60330 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGA12O60330 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA12O60330 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGA12O60330 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA12O60330 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA12O60330 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA12O60330 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA12O60330 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA12O60330 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA12O60330 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 SLC25A1P4-201ENST00000567977 778 ntBASIC19.17■□□□□ 0.66
PCDHGA12O60330 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA12O60330 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA12O60330 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA12O60330 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA12O60330 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA12O60330 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA12O60330 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA12O60330 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA12O60330 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA12O60330 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA12O60330 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGA12O60330 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA12O60330 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA12O60330 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGA12O60330 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGA12O60330 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA12O60330 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHGA12O60330 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGA12O60330 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHGA12O60330 AC091076.1-201ENST00000610741 619 ntBASIC19.16■□□□□ 0.66
PCDHGA12O60330 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGA12O60330 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.16■□□□□ 0.66
PCDHGA12O60330 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA12O60330 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGA12O60330 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA12O60330 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA12O60330 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA12O60330 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGA12O60330 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA12O60330 AC007225.1-201ENST00000566331 1836 ntBASIC19.16■□□□□ 0.66
PCDHGA12O60330 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGA12O60330 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA12O60330 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA12O60330 RCC2P6-201ENST00000526625 1557 ntBASIC19.15■□□□□ 0.66
PCDHGA12O60330 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA12O60330 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA12O60330 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHGA12O60330 INGX-201ENST00000359239 846 ntBASIC19.15■□□□□ 0.66
PCDHGA12O60330 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA12O60330 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHGA12O60330 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PCDHGA12O60330 AC116562.4-202ENST00000641738 218 ntBASIC19.15■□□□□ 0.66
PCDHGA12O60330 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA12O60330 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA12O60330 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA12O60330 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA12O60330 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA12O60330 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA12O60330 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA12O60330 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA12O60330 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA12O60330 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA12O60330 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA12O60330 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA12O60330 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA12O60330 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
PCDHGA12O60330 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA12O60330 DPP3P2-201ENST00000416030 1696 ntBASIC19.14■□□□□ 0.66
PCDHGA12O60330 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA12O60330 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.14■□□□□ 0.66
PCDHGA12O60330 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.14■□□□□ 0.66
PCDHGA12O60330 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA12O60330 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms