Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX4O60224 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SSX4O60224 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SSX4O60224 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSX4O60224 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SSX4O60224 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSX4O60224 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SSX4O60224 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX4O60224 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.49■□□□□ 0.39
SSX4O60224 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.49■□□□□ 0.39
SSX4O60224 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.49■□□□□ 0.39
SSX4O60224 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX4O60224 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.49■□□□□ 0.39
SSX4O60224 AL589743.5-201ENST00000616611 1050 ntBASIC17.49■□□□□ 0.39
SSX4O60224 AC100791.3-201ENST00000617619 330 ntBASIC17.49■□□□□ 0.39
SSX4O60224 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX4O60224 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.49■□□□□ 0.39
SSX4O60224 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX4O60224 AL390961.4-201ENST00000623958 2535 ntBASIC17.49■□□□□ 0.39
SSX4O60224 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX4O60224 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SSX4O60224 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSX4O60224 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SSX4O60224 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX4O60224 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.48■□□□□ 0.39
SSX4O60224 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.48■□□□□ 0.39
SSX4O60224 NOC2LP1-202ENST00000452600 2235 ntBASIC17.48■□□□□ 0.39
SSX4O60224 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.48■□□□□ 0.39
SSX4O60224 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.48■□□□□ 0.39
SSX4O60224 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SSX4O60224 MCRIP2P1-201ENST00000394346 511 ntBASIC17.48■□□□□ 0.39
SSX4O60224 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.48■□□□□ 0.39
SSX4O60224 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.48■□□□□ 0.39
SSX4O60224 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.48■□□□□ 0.39
SSX4O60224 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 AC073648.6-201ENST00000641589 218 ntBASIC17.48■□□□□ 0.39
SSX4O60224 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SSX4O60224 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SSX4O60224 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SSX4O60224 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SSX4O60224 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX4O60224 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX4O60224 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.47■□□□□ 0.39
SSX4O60224 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX4O60224 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX4O60224 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.47■□□□□ 0.39
SSX4O60224 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX4O60224 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
SSX4O60224 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.47■□□□□ 0.39
SSX4O60224 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SSX4O60224 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
SSX4O60224 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX4O60224 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.47■□□□□ 0.39
SSX4O60224 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX4O60224 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.47■□□□□ 0.39
SSX4O60224 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.47■□□□□ 0.39
SSX4O60224 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX4O60224 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX4O60224 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX4O60224 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
SSX4O60224 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX4O60224 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.47■□□□□ 0.39
SSX4O60224 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX4O60224 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX4O60224 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SSX4O60224 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX4O60224 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX4O60224 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SSX4O60224 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSX4O60224 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX4O60224 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX4O60224 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX4O60224 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX4O60224 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.46■□□□□ 0.39
SSX4O60224 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX4O60224 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.46■□□□□ 0.39
SSX4O60224 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SSX4O60224 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX4O60224 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX4O60224 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.46■□□□□ 0.39
SSX4O60224 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.46■□□□□ 0.39
SSX4O60224 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.46■□□□□ 0.39
SSX4O60224 AC007322.3-201ENST00000426526 701 ntBASIC17.46■□□□□ 0.39
SSX4O60224 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.46■□□□□ 0.39
SSX4O60224 UNC93B4-201ENST00000505679 747 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms