Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSNA1O43805 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
SSNA1O43805 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.48■□□□□ 0.23
SSNA1O43805 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.48■□□□□ 0.23
SSNA1O43805 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSNA1O43805 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.48■□□□□ 0.23
SSNA1O43805 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.48■□□□□ 0.23
SSNA1O43805 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSNA1O43805 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SSNA1O43805 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.48■□□□□ 0.23
SSNA1O43805 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.48■□□□□ 0.23
SSNA1O43805 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSNA1O43805 AC053503.5-201ENST00000601508 636 ntBASIC16.48■□□□□ 0.23
SSNA1O43805 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SSNA1O43805 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.48■□□□□ 0.23
SSNA1O43805 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSNA1O43805 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.48■□□□□ 0.23
SSNA1O43805 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSNA1O43805 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSNA1O43805 AC099398.1-201ENST00000567919 2776 ntBASIC16.48■□□□□ 0.23
SSNA1O43805 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SSNA1O43805 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSNA1O43805 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.47■□□□□ 0.23
SSNA1O43805 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 AC005224.4-201ENST00000583262 1652 ntBASIC16.47■□□□□ 0.23
SSNA1O43805 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SSNA1O43805 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.47■□□□□ 0.23
SSNA1O43805 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.47■□□□□ 0.23
SSNA1O43805 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.47■□□□□ 0.23
SSNA1O43805 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.47■□□□□ 0.23
SSNA1O43805 MIR6724-1-201ENST00000616420 92 ntBASIC16.47■□□□□ 0.23
SSNA1O43805 MIR6724-2-201ENST00000616483 92 ntBASIC16.47■□□□□ 0.23
SSNA1O43805 MIR6724-4-201ENST00000617390 92 ntBASIC16.47■□□□□ 0.23
SSNA1O43805 MIR6724-3-201ENST00000622482 92 ntBASIC16.47■□□□□ 0.23
SSNA1O43805 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SSNA1O43805 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSNA1O43805 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.47■□□□□ 0.23
SSNA1O43805 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.47■□□□□ 0.23
SSNA1O43805 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SSNA1O43805 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SSNA1O43805 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SSNA1O43805 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.46■□□□□ 0.23
SSNA1O43805 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SSNA1O43805 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SSNA1O43805 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SSNA1O43805 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSNA1O43805 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.46■□□□□ 0.23
SSNA1O43805 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.46■□□□□ 0.23
SSNA1O43805 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SSNA1O43805 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
SSNA1O43805 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SSNA1O43805 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.45■□□□□ 0.22
SSNA1O43805 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SSNA1O43805 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.45■□□□□ 0.22
SSNA1O43805 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.45■□□□□ 0.22
SSNA1O43805 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
SSNA1O43805 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.45■□□□□ 0.22
SSNA1O43805 EEF1DP3-203ENST00000566025 782 ntBASIC16.45■□□□□ 0.22
SSNA1O43805 ABHD17AP5-201ENST00000580133 923 ntBASIC16.45■□□□□ 0.22
SSNA1O43805 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SSNA1O43805 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
SSNA1O43805 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSNA1O43805 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms