Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 HLA-A-209ENST00000638375 975 ntBASIC17.24■□□□□ 0.35
TRAF3IP2O43734 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 SDHAP1-207ENST00000440850 2000 ntBASIC17.24■□□□□ 0.35
TRAF3IP2O43734 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP2O43734 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 AL359736.2-201ENST00000621992 437 ntBASIC17.23■□□□□ 0.35
TRAF3IP2O43734 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP2O43734 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 AC098590.1-201ENST00000468126 897 ntBASIC17.22■□□□□ 0.35
TRAF3IP2O43734 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP2O43734 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 LINC01465-201ENST00000408887 1940 ntBASIC17.21■□□□□ 0.35
TRAF3IP2O43734 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.21■□□□□ 0.35
TRAF3IP2O43734 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms