Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KDELR3O43731 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KDELR3O43731 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.67■□□□□ 0.74
KDELR3O43731 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KDELR3O43731 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
KDELR3O43731 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KDELR3O43731 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.67■□□□□ 0.74
KDELR3O43731 Z82202.1-201ENST00000623446 1880 ntBASIC19.67■□□□□ 0.74
KDELR3O43731 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.67■□□□□ 0.74
KDELR3O43731 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.66■□□□□ 0.74
KDELR3O43731 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
KDELR3O43731 KRT8P41-201ENST00000533985 1514 ntBASIC19.66■□□□□ 0.74
KDELR3O43731 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KDELR3O43731 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KDELR3O43731 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.66■□□□□ 0.74
KDELR3O43731 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.66■□□□□ 0.74
KDELR3O43731 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.66■□□□□ 0.74
KDELR3O43731 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.66■□□□□ 0.74
KDELR3O43731 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KDELR3O43731 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.66■□□□□ 0.74
KDELR3O43731 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
KDELR3O43731 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
KDELR3O43731 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.66■□□□□ 0.74
KDELR3O43731 SDHAP1-207ENST00000440850 2000 ntBASIC19.66■□□□□ 0.74
KDELR3O43731 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
KDELR3O43731 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KDELR3O43731 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KDELR3O43731 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KDELR3O43731 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KDELR3O43731 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KDELR3O43731 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KDELR3O43731 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KDELR3O43731 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
KDELR3O43731 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KDELR3O43731 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.65■□□□□ 0.74
KDELR3O43731 AC091390.4-202ENST00000476426 537 ntBASIC19.65■□□□□ 0.74
KDELR3O43731 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
KDELR3O43731 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.65■□□□□ 0.74
KDELR3O43731 AL355075.4-201ENST00000554988 638 ntBASIC19.65■□□□□ 0.74
KDELR3O43731 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
KDELR3O43731 AC011298.2-201ENST00000617989 482 ntBASIC19.65■□□□□ 0.74
KDELR3O43731 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.65■□□□□ 0.74
KDELR3O43731 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KDELR3O43731 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KDELR3O43731 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.65■□□□□ 0.74
KDELR3O43731 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
KDELR3O43731 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.65■□□□□ 0.74
KDELR3O43731 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KDELR3O43731 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KDELR3O43731 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
KDELR3O43731 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.64■□□□□ 0.73
KDELR3O43731 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KDELR3O43731 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.64■□□□□ 0.73
KDELR3O43731 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.64■□□□□ 0.73
KDELR3O43731 AC008040.2-201ENST00000461049 708 ntBASIC19.64■□□□□ 0.73
KDELR3O43731 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KDELR3O43731 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.64■□□□□ 0.73
KDELR3O43731 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.64■□□□□ 0.73
KDELR3O43731 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
KDELR3O43731 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.64■□□□□ 0.73
KDELR3O43731 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.64■□□□□ 0.73
KDELR3O43731 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.64■□□□□ 0.73
KDELR3O43731 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.64■□□□□ 0.73
KDELR3O43731 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
KDELR3O43731 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KDELR3O43731 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
KDELR3O43731 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
KDELR3O43731 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.64■□□□□ 0.73
KDELR3O43731 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
KDELR3O43731 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KDELR3O43731 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.63■□□□□ 0.73
KDELR3O43731 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 TSPY15P-201ENST00000457163 923 ntBASIC19.63■□□□□ 0.73
KDELR3O43731 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.63■□□□□ 0.73
KDELR3O43731 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.63■□□□□ 0.73
KDELR3O43731 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
KDELR3O43731 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
KDELR3O43731 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.63■□□□□ 0.73
KDELR3O43731 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDELR3O43731 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.62■□□□□ 0.73
KDELR3O43731 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDELR3O43731 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.62■□□□□ 0.73
KDELR3O43731 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KDELR3O43731 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDELR3O43731 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDELR3O43731 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.62■□□□□ 0.73
KDELR3O43731 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.62■□□□□ 0.73
KDELR3O43731 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.62■□□□□ 0.73
KDELR3O43731 RBM17P1-201ENST00000453646 1190 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms