Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
FOXS1O43638 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXS1O43638 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 AC087499.1-201ENST00000418141 1075 ntBASIC18.24■□□□□ 0.51
FOXS1O43638 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXS1O43638 AL390955.1-201ENST00000428694 934 ntBASIC18.24■□□□□ 0.51
FOXS1O43638 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXS1O43638 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXS1O43638 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXS1O43638 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.24■□□□□ 0.51
FOXS1O43638 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXS1O43638 FITM1-202ENST00000559294 800 ntBASIC18.24■□□□□ 0.51
FOXS1O43638 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXS1O43638 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXS1O43638 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
FOXS1O43638 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
FOXS1O43638 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXS1O43638 KRT8P9-201ENST00000558927 1449 ntBASIC18.23■□□□□ 0.51
FOXS1O43638 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.23■□□□□ 0.51
FOXS1O43638 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
FOXS1O43638 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
FOXS1O43638 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXS1O43638 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
FOXS1O43638 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 MIR1238-201ENST00000408483 83 ntBASIC18.23■□□□□ 0.51
FOXS1O43638 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXS1O43638 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
FOXS1O43638 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXS1O43638 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXS1O43638 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXS1O43638 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
FOXS1O43638 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXS1O43638 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXS1O43638 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
FOXS1O43638 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXS1O43638 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
FOXS1O43638 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
FOXS1O43638 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXS1O43638 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXS1O43638 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXS1O43638 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXS1O43638 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXS1O43638 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXS1O43638 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
FOXS1O43638 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXS1O43638 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXS1O43638 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXS1O43638 FAM207BP-201ENST00000447172 505 ntBASIC18.22■□□□□ 0.51
FOXS1O43638 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXS1O43638 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.22■□□□□ 0.51
FOXS1O43638 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXS1O43638 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.22■□□□□ 0.51
FOXS1O43638 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXS1O43638 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXS1O43638 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.22■□□□□ 0.51
FOXS1O43638 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.22■□□□□ 0.51
FOXS1O43638 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXS1O43638 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXS1O43638 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXS1O43638 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.21■□□□□ 0.51
FOXS1O43638 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXS1O43638 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXS1O43638 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXS1O43638 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.21■□□□□ 0.51
FOXS1O43638 AC097488.1-201ENST00000507834 756 ntBASIC18.21■□□□□ 0.51
FOXS1O43638 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXS1O43638 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXS1O43638 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.21■□□□□ 0.51
FOXS1O43638 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXS1O43638 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.21■□□□□ 0.51
FOXS1O43638 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.21■□□□□ 0.51
FOXS1O43638 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms