Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.81■□□□□ 0.28
XRCC2O43543 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
XRCC2O43543 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
XRCC2O43543 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.81■□□□□ 0.28
XRCC2O43543 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.81■□□□□ 0.28
XRCC2O43543 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
XRCC2O43543 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.8■□□□□ 0.28
XRCC2O43543 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.8■□□□□ 0.28
XRCC2O43543 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
XRCC2O43543 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.8■□□□□ 0.28
XRCC2O43543 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.8■□□□□ 0.28
XRCC2O43543 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
XRCC2O43543 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
XRCC2O43543 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.8■□□□□ 0.28
XRCC2O43543 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.8■□□□□ 0.28
XRCC2O43543 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.8■□□□□ 0.28
XRCC2O43543 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.8■□□□□ 0.28
XRCC2O43543 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
XRCC2O43543 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
XRCC2O43543 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.8■□□□□ 0.28
XRCC2O43543 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC2O43543 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.79■□□□□ 0.28
XRCC2O43543 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC2O43543 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC2O43543 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC2O43543 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC2O43543 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.79■□□□□ 0.28
XRCC2O43543 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.79■□□□□ 0.28
XRCC2O43543 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.79■□□□□ 0.28
XRCC2O43543 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC2O43543 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC2O43543 AC026366.1-201ENST00000488803 879 ntBASIC16.79■□□□□ 0.28
XRCC2O43543 KRT18P6-201ENST00000555540 1265 ntBASIC16.79■□□□□ 0.28
XRCC2O43543 AC008403.3-201ENST00000598924 454 ntBASIC16.79■□□□□ 0.28
XRCC2O43543 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC2O43543 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC2O43543 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC2O43543 BX323043.1-201ENST00000641006 1765 ntBASIC16.79■□□□□ 0.28
XRCC2O43543 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC2O43543 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC2O43543 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
XRCC2O43543 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC2O43543 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.78■□□□□ 0.28
XRCC2O43543 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC2O43543 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC2O43543 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.78■□□□□ 0.28
XRCC2O43543 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.78■□□□□ 0.28
XRCC2O43543 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
XRCC2O43543 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC2O43543 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.78■□□□□ 0.28
XRCC2O43543 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
XRCC2O43543 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.78■□□□□ 0.28
XRCC2O43543 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.78■□□□□ 0.28
XRCC2O43543 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.78■□□□□ 0.28
XRCC2O43543 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC2O43543 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
XRCC2O43543 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
XRCC2O43543 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC2O43543 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC2O43543 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC2O43543 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC2O43543 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
XRCC2O43543 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC2O43543 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC2O43543 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
XRCC2O43543 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
XRCC2O43543 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
XRCC2O43543 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
XRCC2O43543 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.77■□□□□ 0.28
XRCC2O43543 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC2O43543 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.77■□□□□ 0.28
XRCC2O43543 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.77■□□□□ 0.28
XRCC2O43543 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
XRCC2O43543 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms