Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
COCHO43405 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COCHO43405 ZNF815P-204ENST00000434898 1737 ntBASIC20.03■□□□□ 0.8
COCHO43405 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
COCHO43405 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COCHO43405 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.03■□□□□ 0.8
COCHO43405 KRT18P57-201ENST00000443599 1254 ntBASIC20.03■□□□□ 0.8
COCHO43405 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COCHO43405 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
COCHO43405 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
COCHO43405 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
COCHO43405 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.03■□□□□ 0.8
COCHO43405 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.03■□□□□ 0.8
COCHO43405 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COCHO43405 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.03■□□□□ 0.8
COCHO43405 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COCHO43405 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
COCHO43405 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.03■□□□□ 0.8
COCHO43405 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.03■□□□□ 0.8
COCHO43405 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COCHO43405 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COCHO43405 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.02■□□□□ 0.8
COCHO43405 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COCHO43405 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COCHO43405 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.02■□□□□ 0.8
COCHO43405 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
COCHO43405 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COCHO43405 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COCHO43405 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.02■□□□□ 0.8
COCHO43405 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.02■□□□□ 0.8
COCHO43405 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COCHO43405 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COCHO43405 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.02■□□□□ 0.8
COCHO43405 AL137013.1-201ENST00000432946 1228 ntBASIC20.02■□□□□ 0.8
COCHO43405 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.02■□□□□ 0.8
COCHO43405 AC128688.1-201ENST00000487626 519 ntBASIC20.02■□□□□ 0.8
COCHO43405 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.02■□□□□ 0.8
COCHO43405 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.02■□□□□ 0.8
COCHO43405 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COCHO43405 FAM87A-204ENST00000613235 858 ntBASIC20.02■□□□□ 0.8
COCHO43405 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.02■□□□□ 0.8
COCHO43405 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
COCHO43405 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COCHO43405 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.02■□□□□ 0.8
COCHO43405 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.02■□□□□ 0.8
COCHO43405 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
COCHO43405 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COCHO43405 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
COCHO43405 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COCHO43405 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COCHO43405 AC073508.3-201ENST00000619697 1419 ntBASIC20.02■□□□□ 0.79
COCHO43405 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.01■□□□□ 0.79
COCHO43405 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COCHO43405 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
COCHO43405 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COCHO43405 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
COCHO43405 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.01■□□□□ 0.79
COCHO43405 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
COCHO43405 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COCHO43405 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.01■□□□□ 0.79
COCHO43405 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COCHO43405 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COCHO43405 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COCHO43405 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COCHO43405 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
COCHO43405 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COCHO43405 AC010203.1-204ENST00000548782 407 ntBASIC20.01■□□□□ 0.79
COCHO43405 CKBP1-201ENST00000565489 1086 ntBASIC20.01■□□□□ 0.79
COCHO43405 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.01■□□□□ 0.79
COCHO43405 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
COCHO43405 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.01■□□□□ 0.79
COCHO43405 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COCHO43405 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COCHO43405 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
COCHO43405 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20■□□□□ 0.79
COCHO43405 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COCHO43405 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COCHO43405 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20■□□□□ 0.79
COCHO43405 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COCHO43405 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COCHO43405 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COCHO43405 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20■□□□□ 0.79
COCHO43405 SLC25A1P2-201ENST00000430693 912 ntBASIC20■□□□□ 0.79
COCHO43405 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20■□□□□ 0.79
COCHO43405 AC116562.4-202ENST00000641738 218 ntBASIC20■□□□□ 0.79
COCHO43405 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COCHO43405 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20■□□□□ 0.79
COCHO43405 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COCHO43405 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20■□□□□ 0.79
COCHO43405 KRT8P11-201ENST00000409686 1436 ntBASIC20■□□□□ 0.79
COCHO43405 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COCHO43405 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COCHO43405 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20■□□□□ 0.79
COCHO43405 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COCHO43405 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20■□□□□ 0.79
COCHO43405 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COCHO43405 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COCHO43405 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COCHO43405 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
COCHO43405 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms