Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MSI1O43347 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MSI1O43347 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MSI1O43347 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MSI1O43347 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
MSI1O43347 RBM17P1-201ENST00000453646 1190 ntBASIC20.12■□□□□ 0.81
MSI1O43347 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MSI1O43347 B3GAT3P1-201ENST00000471720 806 ntBASIC20.12■□□□□ 0.81
MSI1O43347 AC116562.2-201ENST00000507042 360 ntBASIC20.12■□□□□ 0.81
MSI1O43347 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MSI1O43347 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.12■□□□□ 0.81
MSI1O43347 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.12■□□□□ 0.81
MSI1O43347 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.12■□□□□ 0.81
MSI1O43347 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MSI1O43347 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
MSI1O43347 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
MSI1O43347 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
MSI1O43347 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
MSI1O43347 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MSI1O43347 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MSI1O43347 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
MSI1O43347 ZNF815P-204ENST00000434898 1737 ntBASIC20.11■□□□□ 0.81
MSI1O43347 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MSI1O43347 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.11■□□□□ 0.81
MSI1O43347 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.11■□□□□ 0.81
MSI1O43347 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.11■□□□□ 0.81
MSI1O43347 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.11■□□□□ 0.81
MSI1O43347 BX088651.1-201ENST00000540551 451 ntBASIC20.11■□□□□ 0.81
MSI1O43347 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.11■□□□□ 0.81
MSI1O43347 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.11■□□□□ 0.81
MSI1O43347 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.11■□□□□ 0.81
MSI1O43347 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.11■□□□□ 0.81
MSI1O43347 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.11■□□□□ 0.81
MSI1O43347 AP000525.1-201ENST00000608286 694 ntBASIC20.11■□□□□ 0.81
MSI1O43347 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.11■□□□□ 0.81
MSI1O43347 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.11■□□□□ 0.81
MSI1O43347 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
MSI1O43347 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MSI1O43347 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MSI1O43347 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.11■□□□□ 0.81
MSI1O43347 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MSI1O43347 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
MSI1O43347 AC079598.2-202ENST00000546624 1451 ntBASIC20.11■□□□□ 0.81
MSI1O43347 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MSI1O43347 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSI1O43347 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSI1O43347 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MSI1O43347 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSI1O43347 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSI1O43347 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
MSI1O43347 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSI1O43347 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSI1O43347 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
MSI1O43347 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.1■□□□□ 0.81
MSI1O43347 AC008040.2-201ENST00000461049 708 ntBASIC20.1■□□□□ 0.81
MSI1O43347 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
MSI1O43347 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
MSI1O43347 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MSI1O43347 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSI1O43347 AC104417.2-201ENST00000562989 1793 ntBASIC20.1■□□□□ 0.81
MSI1O43347 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.1■□□□□ 0.81
MSI1O43347 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
MSI1O43347 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.1■□□□□ 0.81
MSI1O43347 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.1■□□□□ 0.81
MSI1O43347 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MSI1O43347 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.09■□□□□ 0.81
MSI1O43347 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MSI1O43347 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
MSI1O43347 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MSI1O43347 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MSI1O43347 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MSI1O43347 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.09■□□□□ 0.81
MSI1O43347 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MSI1O43347 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MSI1O43347 AC011298.2-201ENST00000617989 482 ntBASIC20.09■□□□□ 0.81
MSI1O43347 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
MSI1O43347 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MSI1O43347 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.09■□□□□ 0.81
MSI1O43347 FSCN1P1-201ENST00000568912 1481 ntBASIC20.09■□□□□ 0.81
MSI1O43347 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.09■□□□□ 0.81
MSI1O43347 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MSI1O43347 SDHAP1-207ENST00000440850 2000 ntBASIC20.09■□□□□ 0.81
MSI1O43347 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
MSI1O43347 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSI1O43347 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSI1O43347 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MSI1O43347 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSI1O43347 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.08■□□□□ 0.81
MSI1O43347 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSI1O43347 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSI1O43347 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSI1O43347 AL390955.1-201ENST00000428694 934 ntBASIC20.08■□□□□ 0.81
MSI1O43347 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSI1O43347 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
MSI1O43347 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MSI1O43347 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.08■□□□□ 0.81
MSI1O43347 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSI1O43347 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
MSI1O43347 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.08■□□□□ 0.81
MSI1O43347 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms