Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ABCC4O15439 ZNF815P-204ENST00000434898 1737 ntBASIC24.67■■□□□ 1.54
ABCC4O15439 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ABCC4O15439 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ABCC4O15439 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.66■■□□□ 1.54
ABCC4O15439 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC24.66■■□□□ 1.54
ABCC4O15439 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCC4O15439 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCC4O15439 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ABCC4O15439 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC24.66■■□□□ 1.54
ABCC4O15439 AC113347.1-201ENST00000413321 391 ntBASIC24.66■■□□□ 1.54
ABCC4O15439 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.66■■□□□ 1.54
ABCC4O15439 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.66■■□□□ 1.54
ABCC4O15439 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.66■■□□□ 1.54
ABCC4O15439 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.66■■□□□ 1.54
ABCC4O15439 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.66■■□□□ 1.54
ABCC4O15439 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.66■■□□□ 1.54
ABCC4O15439 LINC01568-207ENST00000641790 1380 ntBASIC24.66■■□□□ 1.54
ABCC4O15439 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCC4O15439 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCC4O15439 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ABCC4O15439 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ABCC4O15439 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC24.66■■□□□ 1.54
ABCC4O15439 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ABCC4O15439 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC24.66■■□□□ 1.54
ABCC4O15439 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCC4O15439 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCC4O15439 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCC4O15439 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCC4O15439 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ABCC4O15439 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC24.65■■□□□ 1.54
ABCC4O15439 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCC4O15439 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ABCC4O15439 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
ABCC4O15439 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.65■■□□□ 1.54
ABCC4O15439 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC24.65■■□□□ 1.54
ABCC4O15439 KRT18P57-201ENST00000443599 1254 ntBASIC24.65■■□□□ 1.54
ABCC4O15439 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCC4O15439 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.65■■□□□ 1.54
ABCC4O15439 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ABCC4O15439 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCC4O15439 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCC4O15439 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCC4O15439 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.65■■□□□ 1.54
ABCC4O15439 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCC4O15439 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ABCC4O15439 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ABCC4O15439 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC24.64■■□□□ 1.54
ABCC4O15439 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.64■■□□□ 1.54
ABCC4O15439 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ABCC4O15439 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC24.64■■□□□ 1.54
ABCC4O15439 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC24.64■■□□□ 1.54
ABCC4O15439 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ABCC4O15439 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.64■■□□□ 1.54
ABCC4O15439 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC24.64■■□□□ 1.54
ABCC4O15439 AL049597.2-201ENST00000565575 961 ntBASIC24.64■■□□□ 1.54
ABCC4O15439 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.64■■□□□ 1.54
ABCC4O15439 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC24.64■■□□□ 1.54
ABCC4O15439 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ABCC4O15439 HLA-A-209ENST00000638375 975 ntBASIC24.64■■□□□ 1.54
ABCC4O15439 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ABCC4O15439 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
ABCC4O15439 AC104417.2-201ENST00000562989 1793 ntBASIC24.64■■□□□ 1.54
ABCC4O15439 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ABCC4O15439 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
ABCC4O15439 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
ABCC4O15439 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.64■■□□□ 1.53
ABCC4O15439 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ABCC4O15439 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
ABCC4O15439 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
ABCC4O15439 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ABCC4O15439 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ABCC4O15439 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC24.64■■□□□ 1.53
ABCC4O15439 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
ABCC4O15439 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ABCC4O15439 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ABCC4O15439 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC24.63■■□□□ 1.53
ABCC4O15439 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.63■■□□□ 1.53
ABCC4O15439 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.63■■□□□ 1.53
ABCC4O15439 NAPSB-206ENST00000562112 1266 ntBASIC24.63■■□□□ 1.53
ABCC4O15439 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.63■■□□□ 1.53
ABCC4O15439 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
ABCC4O15439 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.63■■□□□ 1.53
ABCC4O15439 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ABCC4O15439 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC24.63■■□□□ 1.53
ABCC4O15439 ANKRD18DP-204ENST00000455355 1975 ntBASIC24.63■■□□□ 1.53
ABCC4O15439 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ABCC4O15439 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.63■■□□□ 1.53
ABCC4O15439 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC24.63■■□□□ 1.53
ABCC4O15439 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ABCC4O15439 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ABCC4O15439 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
ABCC4O15439 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ABCC4O15439 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.63■■□□□ 1.53
ABCC4O15439 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ABCC4O15439 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC24.62■■□□□ 1.53
ABCC4O15439 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.62■■□□□ 1.53
ABCC4O15439 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC24.62■■□□□ 1.53
ABCC4O15439 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ABCC4O15439 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms